Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30780 | 92563;92564;92565 | chr2:178549288;178549287;178549286 | chr2:179414015;179414014;179414013 |
N2AB | 29139 | 87640;87641;87642 | chr2:178549288;178549287;178549286 | chr2:179414015;179414014;179414013 |
N2A | 28212 | 84859;84860;84861 | chr2:178549288;178549287;178549286 | chr2:179414015;179414014;179414013 |
N2B | 21715 | 65368;65369;65370 | chr2:178549288;178549287;178549286 | chr2:179414015;179414014;179414013 |
Novex-1 | 21840 | 65743;65744;65745 | chr2:178549288;178549287;178549286 | chr2:179414015;179414014;179414013 |
Novex-2 | 21907 | 65944;65945;65946 | chr2:178549288;178549287;178549286 | chr2:179414015;179414014;179414013 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs1698389479 | None | 0.09 | N | 0.421 | 0.171 | 0.325263233342 | gnomAD-4.0.0 | 1.36834E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99421E-07 | 0 | 1.6564E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.6129 | likely_pathogenic | 0.6849 | pathogenic | -2.205 | Highly Destabilizing | 0.388 | N | 0.528 | neutral | None | None | None | None | N |
F/C | 0.1533 | likely_benign | 0.1998 | benign | -1.614 | Destabilizing | 0.975 | D | 0.597 | neutral | N | 0.488852115 | None | None | N |
F/D | 0.8655 | likely_pathogenic | 0.891 | pathogenic | -1.718 | Destabilizing | 0.69 | D | 0.567 | neutral | None | None | None | None | N |
F/E | 0.8371 | likely_pathogenic | 0.866 | pathogenic | -1.53 | Destabilizing | 0.241 | N | 0.5 | neutral | None | None | None | None | N |
F/G | 0.7703 | likely_pathogenic | 0.8218 | pathogenic | -2.608 | Highly Destabilizing | 0.388 | N | 0.498 | neutral | None | None | None | None | N |
F/H | 0.2624 | likely_benign | 0.3953 | ambiguous | -0.938 | Destabilizing | 0.001 | N | 0.331 | neutral | None | None | None | None | N |
F/I | 0.2947 | likely_benign | 0.3219 | benign | -0.933 | Destabilizing | 0.324 | N | 0.425 | neutral | N | 0.478370224 | None | None | N |
F/K | 0.8091 | likely_pathogenic | 0.8339 | pathogenic | -1.87 | Destabilizing | 0.388 | N | 0.545 | neutral | None | None | None | None | N |
F/L | 0.7787 | likely_pathogenic | 0.8105 | pathogenic | -0.933 | Destabilizing | 0.09 | N | 0.421 | neutral | N | 0.466569901 | None | None | N |
F/M | 0.4732 | ambiguous | 0.5119 | ambiguous | -0.801 | Destabilizing | 0.932 | D | 0.469 | neutral | None | None | None | None | N |
F/N | 0.6105 | likely_pathogenic | 0.6925 | pathogenic | -2.307 | Highly Destabilizing | 0.241 | N | 0.537 | neutral | None | None | None | None | N |
F/P | 0.9957 | likely_pathogenic | 0.9964 | pathogenic | -1.36 | Destabilizing | 0.818 | D | 0.586 | neutral | None | None | None | None | N |
F/Q | 0.5998 | likely_pathogenic | 0.6624 | pathogenic | -2.171 | Highly Destabilizing | 0.69 | D | 0.586 | neutral | None | None | None | None | N |
F/R | 0.6893 | likely_pathogenic | 0.7286 | pathogenic | -1.473 | Destabilizing | 0.69 | D | 0.584 | neutral | None | None | None | None | N |
F/S | 0.5226 | ambiguous | 0.5931 | pathogenic | -3.029 | Highly Destabilizing | 0.324 | N | 0.489 | neutral | N | 0.488703025 | None | None | N |
F/T | 0.6572 | likely_pathogenic | 0.7002 | pathogenic | -2.73 | Highly Destabilizing | 0.563 | D | 0.511 | neutral | None | None | None | None | N |
F/V | 0.2796 | likely_benign | 0.308 | benign | -1.36 | Destabilizing | 0.324 | N | 0.466 | neutral | N | 0.49565787 | None | None | N |
F/W | 0.3537 | ambiguous | 0.3768 | ambiguous | 0.04 | Stabilizing | 0.818 | D | 0.49 | neutral | None | None | None | None | N |
F/Y | 0.0702 | likely_benign | 0.0804 | benign | -0.33 | Destabilizing | 0.001 | N | 0.149 | neutral | N | 0.445269122 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.