Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30794 | 92605;92606;92607 | chr2:178549246;178549245;178549244 | chr2:179413973;179413972;179413971 |
N2AB | 29153 | 87682;87683;87684 | chr2:178549246;178549245;178549244 | chr2:179413973;179413972;179413971 |
N2A | 28226 | 84901;84902;84903 | chr2:178549246;178549245;178549244 | chr2:179413973;179413972;179413971 |
N2B | 21729 | 65410;65411;65412 | chr2:178549246;178549245;178549244 | chr2:179413973;179413972;179413971 |
Novex-1 | 21854 | 65785;65786;65787 | chr2:178549246;178549245;178549244 | chr2:179413973;179413972;179413971 |
Novex-2 | 21921 | 65986;65987;65988 | chr2:178549246;178549245;178549244 | chr2:179413973;179413972;179413971 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | rs773998423 | -1.381 | None | N | 0.184 | 0.303 | 0.117506650769 | gnomAD-2.1.1 | 8.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.77E-05 | 0 |
H/R | rs773998423 | -1.381 | None | N | 0.184 | 0.303 | 0.117506650769 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
H/R | rs773998423 | -1.381 | None | N | 0.184 | 0.303 | 0.117506650769 | gnomAD-4.0.0 | 7.43576E-06 | None | None | None | None | N | None | 0 | 3.33444E-05 | None | 0 | 0 | None | 0 | 0 | 7.62797E-06 | 0 | 1.60113E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.4599 | ambiguous | 0.4746 | ambiguous | -1.851 | Destabilizing | 0.104 | N | 0.68 | prob.neutral | None | None | None | None | N |
H/C | 0.1817 | likely_benign | 0.181 | benign | -1.056 | Destabilizing | 0.958 | D | 0.765 | deleterious | None | None | None | None | N |
H/D | 0.6681 | likely_pathogenic | 0.6972 | pathogenic | -1.915 | Destabilizing | 0.175 | N | 0.666 | neutral | N | 0.437209786 | None | None | N |
H/E | 0.5483 | ambiguous | 0.568 | pathogenic | -1.717 | Destabilizing | 0.055 | N | 0.525 | neutral | None | None | None | None | N |
H/F | 0.4387 | ambiguous | 0.4408 | ambiguous | 0.154 | Stabilizing | 0.667 | D | 0.743 | deleterious | None | None | None | None | N |
H/G | 0.5851 | likely_pathogenic | 0.5812 | pathogenic | -2.244 | Highly Destabilizing | 0.22 | N | 0.689 | prob.neutral | None | None | None | None | N |
H/I | 0.4853 | ambiguous | 0.482 | ambiguous | -0.673 | Destabilizing | 0.667 | D | 0.745 | deleterious | None | None | None | None | N |
H/K | 0.3167 | likely_benign | 0.3275 | benign | -1.185 | Destabilizing | 0.055 | N | 0.656 | neutral | None | None | None | None | N |
H/L | 0.1759 | likely_benign | 0.1689 | benign | -0.673 | Destabilizing | 0.175 | N | 0.694 | prob.neutral | N | 0.410428617 | None | None | N |
H/M | 0.6144 | likely_pathogenic | 0.622 | pathogenic | -0.888 | Destabilizing | 0.667 | D | 0.753 | deleterious | None | None | None | None | N |
H/N | 0.2348 | likely_benign | 0.2472 | benign | -1.873 | Destabilizing | 0.175 | N | 0.571 | neutral | N | 0.444231759 | None | None | N |
H/P | 0.9142 | likely_pathogenic | 0.9281 | pathogenic | -1.059 | Destabilizing | 0.602 | D | 0.743 | deleterious | N | 0.475074741 | None | None | N |
H/Q | 0.1854 | likely_benign | 0.2076 | benign | -1.453 | Destabilizing | 0.003 | N | 0.294 | neutral | N | 0.368021847 | None | None | N |
H/R | 0.0851 | likely_benign | 0.0901 | benign | -1.339 | Destabilizing | None | N | 0.184 | neutral | N | 0.208865264 | None | None | N |
H/S | 0.3948 | ambiguous | 0.4116 | ambiguous | -2.003 | Highly Destabilizing | 0.104 | N | 0.639 | neutral | None | None | None | None | N |
H/T | 0.4496 | ambiguous | 0.4634 | ambiguous | -1.698 | Destabilizing | 0.22 | N | 0.693 | prob.neutral | None | None | None | None | N |
H/V | 0.4077 | ambiguous | 0.4064 | ambiguous | -1.059 | Destabilizing | 0.22 | N | 0.726 | prob.delet. | None | None | None | None | N |
H/W | 0.467 | ambiguous | 0.4734 | ambiguous | 0.679 | Stabilizing | 0.958 | D | 0.752 | deleterious | None | None | None | None | N |
H/Y | 0.1565 | likely_benign | 0.1491 | benign | 0.438 | Stabilizing | 0.301 | N | 0.639 | neutral | N | 0.403617288 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.