Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30798 | 92617;92618;92619 | chr2:178549234;178549233;178549232 | chr2:179413961;179413960;179413959 |
N2AB | 29157 | 87694;87695;87696 | chr2:178549234;178549233;178549232 | chr2:179413961;179413960;179413959 |
N2A | 28230 | 84913;84914;84915 | chr2:178549234;178549233;178549232 | chr2:179413961;179413960;179413959 |
N2B | 21733 | 65422;65423;65424 | chr2:178549234;178549233;178549232 | chr2:179413961;179413960;179413959 |
Novex-1 | 21858 | 65797;65798;65799 | chr2:178549234;178549233;178549232 | chr2:179413961;179413960;179413959 |
Novex-2 | 21925 | 65998;65999;66000 | chr2:178549234;178549233;178549232 | chr2:179413961;179413960;179413959 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 1.0 | N | 0.627 | 0.276 | 0.238705975628 | gnomAD-4.0.0 | 1.59115E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85781E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2406 | likely_benign | 0.2471 | benign | -0.887 | Destabilizing | 0.999 | D | 0.684 | prob.neutral | N | 0.468847116 | None | None | N |
E/C | 0.854 | likely_pathogenic | 0.8637 | pathogenic | -0.641 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
E/D | 0.5881 | likely_pathogenic | 0.6127 | pathogenic | -1.44 | Destabilizing | 0.999 | D | 0.499 | neutral | N | 0.515971086 | None | None | N |
E/F | 0.8599 | likely_pathogenic | 0.8718 | pathogenic | -1.017 | Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | N |
E/G | 0.3868 | ambiguous | 0.3989 | ambiguous | -1.219 | Destabilizing | 1.0 | D | 0.769 | deleterious | N | 0.50938772 | None | None | N |
E/H | 0.705 | likely_pathogenic | 0.7109 | pathogenic | -1.268 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
E/I | 0.3253 | likely_benign | 0.3744 | ambiguous | 0.012 | Stabilizing | 1.0 | D | 0.898 | deleterious | None | None | None | None | N |
E/K | 0.1857 | likely_benign | 0.1805 | benign | -0.872 | Destabilizing | 0.999 | D | 0.559 | neutral | N | 0.481217379 | None | None | N |
E/L | 0.5536 | ambiguous | 0.5852 | pathogenic | 0.012 | Stabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
E/M | 0.4749 | ambiguous | 0.5138 | ambiguous | 0.499 | Stabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
E/N | 0.631 | likely_pathogenic | 0.6503 | pathogenic | -1.093 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
E/P | 0.9937 | likely_pathogenic | 0.9945 | pathogenic | -0.268 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
E/Q | 0.1409 | likely_benign | 0.1396 | benign | -0.977 | Destabilizing | 1.0 | D | 0.627 | neutral | N | 0.475519387 | None | None | N |
E/R | 0.3356 | likely_benign | 0.3274 | benign | -0.822 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/S | 0.3738 | ambiguous | 0.3862 | ambiguous | -1.537 | Destabilizing | 0.999 | D | 0.585 | neutral | None | None | None | None | N |
E/T | 0.3532 | ambiguous | 0.3867 | ambiguous | -1.247 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
E/V | 0.1837 | likely_benign | 0.2072 | benign | -0.268 | Destabilizing | 1.0 | D | 0.826 | deleterious | N | 0.472007433 | None | None | N |
E/W | 0.9585 | likely_pathogenic | 0.961 | pathogenic | -1.077 | Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
E/Y | 0.8233 | likely_pathogenic | 0.8362 | pathogenic | -0.813 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.