Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30805 | 92638;92639;92640 | chr2:178549213;178549212;178549211 | chr2:179413940;179413939;179413938 |
N2AB | 29164 | 87715;87716;87717 | chr2:178549213;178549212;178549211 | chr2:179413940;179413939;179413938 |
N2A | 28237 | 84934;84935;84936 | chr2:178549213;178549212;178549211 | chr2:179413940;179413939;179413938 |
N2B | 21740 | 65443;65444;65445 | chr2:178549213;178549212;178549211 | chr2:179413940;179413939;179413938 |
Novex-1 | 21865 | 65818;65819;65820 | chr2:178549213;178549212;178549211 | chr2:179413940;179413939;179413938 |
Novex-2 | 21932 | 66019;66020;66021 | chr2:178549213;178549212;178549211 | chr2:179413940;179413939;179413938 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs1698365968 | None | 0.698 | N | 0.691 | 0.291 | 0.272639205421 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
P/S | rs1698365968 | None | 0.698 | N | 0.691 | 0.291 | 0.272639205421 | gnomAD-4.0.0 | 6.57289E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46985E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0934 | likely_benign | 0.0847 | benign | -1.204 | Destabilizing | 0.014 | N | 0.415 | neutral | N | 0.470690429 | None | None | I |
P/C | 0.5348 | ambiguous | 0.498 | ambiguous | -0.665 | Destabilizing | 0.994 | D | 0.737 | prob.delet. | None | None | None | None | I |
P/D | 0.4674 | ambiguous | 0.4257 | ambiguous | -1.297 | Destabilizing | 0.754 | D | 0.685 | prob.neutral | None | None | None | None | I |
P/E | 0.2575 | likely_benign | 0.221 | benign | -1.389 | Destabilizing | 0.043 | N | 0.406 | neutral | None | None | None | None | I |
P/F | 0.4421 | ambiguous | 0.4029 | ambiguous | -1.232 | Destabilizing | 0.994 | D | 0.721 | prob.delet. | None | None | None | None | I |
P/G | 0.3459 | ambiguous | 0.3108 | benign | -1.413 | Destabilizing | 0.754 | D | 0.677 | prob.neutral | None | None | None | None | I |
P/H | 0.221 | likely_benign | 0.2011 | benign | -0.978 | Destabilizing | 0.992 | D | 0.705 | prob.neutral | N | 0.481096156 | None | None | I |
P/I | 0.2992 | likely_benign | 0.2642 | benign | -0.765 | Destabilizing | 0.956 | D | 0.727 | prob.delet. | None | None | None | None | I |
P/K | 0.2222 | likely_benign | 0.1947 | benign | -0.997 | Destabilizing | 0.754 | D | 0.677 | prob.neutral | None | None | None | None | I |
P/L | 0.1124 | likely_benign | 0.1022 | benign | -0.765 | Destabilizing | 0.89 | D | 0.671 | neutral | N | 0.49695431 | None | None | I |
P/M | 0.2779 | likely_benign | 0.2496 | benign | -0.437 | Destabilizing | 0.998 | D | 0.707 | prob.neutral | None | None | None | None | I |
P/N | 0.3388 | likely_benign | 0.3103 | benign | -0.641 | Destabilizing | 0.956 | D | 0.711 | prob.delet. | None | None | None | None | I |
P/Q | 0.158 | likely_benign | 0.139 | benign | -0.963 | Destabilizing | 0.915 | D | 0.685 | prob.neutral | None | None | None | None | I |
P/R | 0.1696 | likely_benign | 0.1525 | benign | -0.338 | Destabilizing | 0.942 | D | 0.715 | prob.delet. | N | 0.490700342 | None | None | I |
P/S | 0.1636 | likely_benign | 0.1501 | benign | -0.995 | Destabilizing | 0.698 | D | 0.691 | prob.neutral | N | 0.519060379 | None | None | I |
P/T | 0.1286 | likely_benign | 0.1158 | benign | -1.0 | Destabilizing | 0.942 | D | 0.674 | neutral | N | 0.499127824 | None | None | I |
P/V | 0.2026 | likely_benign | 0.1788 | benign | -0.877 | Destabilizing | 0.915 | D | 0.647 | neutral | None | None | None | None | I |
P/W | 0.6629 | likely_pathogenic | 0.6185 | pathogenic | -1.317 | Destabilizing | 0.998 | D | 0.693 | prob.neutral | None | None | None | None | I |
P/Y | 0.4458 | ambiguous | 0.4026 | ambiguous | -1.065 | Destabilizing | 0.998 | D | 0.731 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.