Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3081 | 9466;9467;9468 | chr2:178768078;178768077;178768076 | chr2:179632805;179632804;179632803 |
N2AB | 3081 | 9466;9467;9468 | chr2:178768078;178768077;178768076 | chr2:179632805;179632804;179632803 |
N2A | 3081 | 9466;9467;9468 | chr2:178768078;178768077;178768076 | chr2:179632805;179632804;179632803 |
N2B | 3035 | 9328;9329;9330 | chr2:178768078;178768077;178768076 | chr2:179632805;179632804;179632803 |
Novex-1 | 3035 | 9328;9329;9330 | chr2:178768078;178768077;178768076 | chr2:179632805;179632804;179632803 |
Novex-2 | 3035 | 9328;9329;9330 | chr2:178768078;178768077;178768076 | chr2:179632805;179632804;179632803 |
Novex-3 | 3081 | 9466;9467;9468 | chr2:178768078;178768077;178768076 | chr2:179632805;179632804;179632803 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1037728221 | None | 0.001 | N | 0.246 | 0.154 | 0.210429274316 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs1037728221 | None | 0.001 | N | 0.246 | 0.154 | 0.210429274316 | gnomAD-4.0.0 | 2.56121E-06 | None | None | None | None | N | None | 1.69102E-05 | 0 | None | 0 | 2.42542E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9159 | likely_pathogenic | 0.9312 | pathogenic | -2.476 | Highly Destabilizing | 0.296 | N | 0.651 | neutral | D | 0.533128328 | None | None | N |
V/C | 0.975 | likely_pathogenic | 0.9873 | pathogenic | -1.897 | Destabilizing | 0.991 | D | 0.767 | deleterious | None | None | None | None | N |
V/D | 0.997 | likely_pathogenic | 0.997 | pathogenic | -3.187 | Highly Destabilizing | 0.879 | D | 0.859 | deleterious | D | 0.780365303 | None | None | N |
V/E | 0.9915 | likely_pathogenic | 0.9916 | pathogenic | -2.928 | Highly Destabilizing | 0.906 | D | 0.819 | deleterious | None | None | None | None | N |
V/F | 0.8434 | likely_pathogenic | 0.8765 | pathogenic | -1.194 | Destabilizing | 0.782 | D | 0.799 | deleterious | D | 0.655986275 | None | None | N |
V/G | 0.9487 | likely_pathogenic | 0.951 | pathogenic | -2.995 | Highly Destabilizing | 0.879 | D | 0.848 | deleterious | D | 0.780365303 | None | None | N |
V/H | 0.9978 | likely_pathogenic | 0.9984 | pathogenic | -2.673 | Highly Destabilizing | 0.991 | D | 0.847 | deleterious | None | None | None | None | N |
V/I | 0.1102 | likely_benign | 0.1153 | benign | -0.97 | Destabilizing | 0.001 | N | 0.246 | neutral | N | 0.516858502 | None | None | N |
V/K | 0.9946 | likely_pathogenic | 0.995 | pathogenic | -1.867 | Destabilizing | 0.906 | D | 0.821 | deleterious | None | None | None | None | N |
V/L | 0.3914 | ambiguous | 0.5578 | ambiguous | -0.97 | Destabilizing | 0.001 | N | 0.321 | neutral | D | 0.52977745 | None | None | N |
V/M | 0.5937 | likely_pathogenic | 0.7138 | pathogenic | -1.218 | Destabilizing | 0.826 | D | 0.707 | prob.neutral | None | None | None | None | N |
V/N | 0.9886 | likely_pathogenic | 0.9895 | pathogenic | -2.34 | Highly Destabilizing | 0.967 | D | 0.852 | deleterious | None | None | None | None | N |
V/P | 0.9968 | likely_pathogenic | 0.9965 | pathogenic | -1.455 | Destabilizing | 0.967 | D | 0.822 | deleterious | None | None | None | None | N |
V/Q | 0.9932 | likely_pathogenic | 0.9946 | pathogenic | -2.073 | Highly Destabilizing | 0.967 | D | 0.811 | deleterious | None | None | None | None | N |
V/R | 0.9926 | likely_pathogenic | 0.9932 | pathogenic | -1.802 | Destabilizing | 0.906 | D | 0.856 | deleterious | None | None | None | None | N |
V/S | 0.9774 | likely_pathogenic | 0.9803 | pathogenic | -2.86 | Highly Destabilizing | 0.906 | D | 0.815 | deleterious | None | None | None | None | N |
V/T | 0.8814 | likely_pathogenic | 0.9117 | pathogenic | -2.477 | Highly Destabilizing | 0.575 | D | 0.679 | prob.neutral | None | None | None | None | N |
V/W | 0.9979 | likely_pathogenic | 0.9986 | pathogenic | -1.74 | Destabilizing | 0.991 | D | 0.845 | deleterious | None | None | None | None | N |
V/Y | 0.9894 | likely_pathogenic | 0.9917 | pathogenic | -1.529 | Destabilizing | 0.906 | D | 0.794 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.