Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30810 | 92653;92654;92655 | chr2:178549198;178549197;178549196 | chr2:179413925;179413924;179413923 |
N2AB | 29169 | 87730;87731;87732 | chr2:178549198;178549197;178549196 | chr2:179413925;179413924;179413923 |
N2A | 28242 | 84949;84950;84951 | chr2:178549198;178549197;178549196 | chr2:179413925;179413924;179413923 |
N2B | 21745 | 65458;65459;65460 | chr2:178549198;178549197;178549196 | chr2:179413925;179413924;179413923 |
Novex-1 | 21870 | 65833;65834;65835 | chr2:178549198;178549197;178549196 | chr2:179413925;179413924;179413923 |
Novex-2 | 21937 | 66034;66035;66036 | chr2:178549198;178549197;178549196 | chr2:179413925;179413924;179413923 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | rs1021262891 | None | 0.999 | D | 0.712 | 0.471 | 0.68573823706 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
S/L | rs1021262891 | None | 0.999 | D | 0.712 | 0.471 | 0.68573823706 | gnomAD-4.0.0 | 6.08976E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.22956E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.5319 | ambiguous | 0.5669 | pathogenic | -0.479 | Destabilizing | 0.994 | D | 0.696 | prob.delet. | N | 0.500301777 | None | None | N |
S/C | 0.3478 | ambiguous | 0.4507 | ambiguous | -0.128 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
S/D | 0.9831 | likely_pathogenic | 0.9821 | pathogenic | -0.652 | Destabilizing | 0.998 | D | 0.71 | prob.delet. | None | None | None | None | N |
S/E | 0.9932 | likely_pathogenic | 0.9938 | pathogenic | -0.464 | Destabilizing | 0.998 | D | 0.695 | prob.delet. | None | None | None | None | N |
S/F | 0.9789 | likely_pathogenic | 0.9794 | pathogenic | -0.333 | Destabilizing | 0.999 | D | 0.846 | deleterious | None | None | None | None | N |
S/G | 0.4055 | ambiguous | 0.3873 | ambiguous | -0.873 | Destabilizing | 0.998 | D | 0.691 | prob.delet. | None | None | None | None | N |
S/H | 0.9783 | likely_pathogenic | 0.9795 | pathogenic | -1.12 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
S/I | 0.9521 | likely_pathogenic | 0.9637 | pathogenic | 0.517 | Stabilizing | 0.999 | D | 0.821 | deleterious | None | None | None | None | N |
S/K | 0.9989 | likely_pathogenic | 0.9989 | pathogenic | 0.152 | Stabilizing | 0.998 | D | 0.705 | prob.delet. | None | None | None | None | N |
S/L | 0.8278 | likely_pathogenic | 0.8473 | pathogenic | 0.517 | Stabilizing | 0.999 | D | 0.712 | prob.delet. | D | 0.523725631 | None | None | N |
S/M | 0.898 | likely_pathogenic | 0.919 | pathogenic | 0.296 | Stabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
S/N | 0.9255 | likely_pathogenic | 0.9232 | pathogenic | -0.469 | Destabilizing | 0.998 | D | 0.725 | deleterious | None | None | None | None | N |
S/P | 0.9766 | likely_pathogenic | 0.9761 | pathogenic | 0.221 | Stabilizing | 0.999 | D | 0.831 | deleterious | D | 0.529295038 | None | None | N |
S/Q | 0.9888 | likely_pathogenic | 0.9901 | pathogenic | -0.223 | Destabilizing | 0.999 | D | 0.883 | deleterious | None | None | None | None | N |
S/R | 0.9976 | likely_pathogenic | 0.9976 | pathogenic | -0.239 | Destabilizing | 0.999 | D | 0.836 | deleterious | None | None | None | None | N |
S/T | 0.2334 | likely_benign | 0.254 | benign | -0.201 | Destabilizing | 0.997 | D | 0.697 | prob.delet. | N | 0.517435865 | None | None | N |
S/V | 0.911 | likely_pathogenic | 0.933 | pathogenic | 0.221 | Stabilizing | 0.999 | D | 0.811 | deleterious | None | None | None | None | N |
S/W | 0.9816 | likely_pathogenic | 0.9813 | pathogenic | -0.581 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
S/Y | 0.9748 | likely_pathogenic | 0.9749 | pathogenic | -0.083 | Destabilizing | 0.999 | D | 0.875 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.