Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC3081292659;92660;92661 chr2:178549192;178549191;178549190chr2:179413919;179413918;179413917
N2AB2917187736;87737;87738 chr2:178549192;178549191;178549190chr2:179413919;179413918;179413917
N2A2824484955;84956;84957 chr2:178549192;178549191;178549190chr2:179413919;179413918;179413917
N2B2174765464;65465;65466 chr2:178549192;178549191;178549190chr2:179413919;179413918;179413917
Novex-12187265839;65840;65841 chr2:178549192;178549191;178549190chr2:179413919;179413918;179413917
Novex-22193966040;66041;66042 chr2:178549192;178549191;178549190chr2:179413919;179413918;179413917
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTC
  • RefSeq wild type template codon: GAG
  • Domain: Fn3-112
  • Domain position: 94
  • Structural Position: 126
  • Q(SASA): 0.1916
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F rs776239659 -1.217 0.992 N 0.747 0.17 0.445007932271 gnomAD-2.1.1 4.02E-06 None None None None N None 0 0 None 0 0 None 0 None 0 8.88E-06 0
L/F rs776239659 -1.217 0.992 N 0.747 0.17 0.445007932271 gnomAD-4.0.0 3.18262E-06 None None None None N None 0 0 None 0 0 None 0 0 5.71582E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.3087 likely_benign 0.276 benign -1.204 Destabilizing 0.797 D 0.653 prob.neutral None None None None N
L/C 0.5392 ambiguous 0.4975 ambiguous -0.659 Destabilizing 0.998 D 0.707 prob.delet. None None None None N
L/D 0.8105 likely_pathogenic 0.7742 pathogenic -0.639 Destabilizing 0.965 D 0.825 deleterious None None None None N
L/E 0.5429 ambiguous 0.4945 ambiguous -0.695 Destabilizing 0.965 D 0.813 deleterious None None None None N
L/F 0.175 likely_benign 0.1506 benign -0.94 Destabilizing 0.992 D 0.747 deleterious N 0.469663348 None None N
L/G 0.5625 ambiguous 0.5289 ambiguous -1.447 Destabilizing 0.965 D 0.819 deleterious None None None None N
L/H 0.3161 likely_benign 0.268 benign -0.592 Destabilizing 0.998 D 0.878 deleterious N 0.472783798 None None N
L/I 0.1533 likely_benign 0.1293 benign -0.65 Destabilizing 0.923 D 0.642 neutral N 0.463969526 None None N
L/K 0.4116 ambiguous 0.3662 ambiguous -0.754 Destabilizing 0.965 D 0.801 deleterious None None None None N
L/M 0.1366 likely_benign 0.1286 benign -0.499 Destabilizing 0.994 D 0.709 prob.delet. None None None None N
L/N 0.4452 ambiguous 0.4081 ambiguous -0.49 Destabilizing 0.982 D 0.853 deleterious None None None None N
L/P 0.1818 likely_benign 0.1392 benign -0.802 Destabilizing 0.041 N 0.695 prob.delet. N 0.446770632 None None N
L/Q 0.2145 likely_benign 0.1798 benign -0.731 Destabilizing 0.982 D 0.843 deleterious None None None None N
L/R 0.3125 likely_benign 0.2787 benign -0.093 Destabilizing 0.977 D 0.824 deleterious N 0.464301212 None None N
L/S 0.4029 ambiguous 0.3607 ambiguous -1.013 Destabilizing 0.965 D 0.802 deleterious None None None None N
L/T 0.3385 likely_benign 0.2899 benign -0.961 Destabilizing 0.965 D 0.733 deleterious None None None None N
L/V 0.144 likely_benign 0.1227 benign -0.802 Destabilizing 0.856 D 0.619 neutral N 0.484227368 None None N
L/W 0.3101 likely_benign 0.2791 benign -0.948 Destabilizing 0.998 D 0.803 deleterious None None None None N
L/Y 0.3655 ambiguous 0.3311 benign -0.739 Destabilizing 0.994 D 0.751 deleterious None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.