Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30812 | 92659;92660;92661 | chr2:178549192;178549191;178549190 | chr2:179413919;179413918;179413917 |
N2AB | 29171 | 87736;87737;87738 | chr2:178549192;178549191;178549190 | chr2:179413919;179413918;179413917 |
N2A | 28244 | 84955;84956;84957 | chr2:178549192;178549191;178549190 | chr2:179413919;179413918;179413917 |
N2B | 21747 | 65464;65465;65466 | chr2:178549192;178549191;178549190 | chr2:179413919;179413918;179413917 |
Novex-1 | 21872 | 65839;65840;65841 | chr2:178549192;178549191;178549190 | chr2:179413919;179413918;179413917 |
Novex-2 | 21939 | 66040;66041;66042 | chr2:178549192;178549191;178549190 | chr2:179413919;179413918;179413917 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs776239659 | -1.217 | 0.992 | N | 0.747 | 0.17 | 0.445007932271 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
L/F | rs776239659 | -1.217 | 0.992 | N | 0.747 | 0.17 | 0.445007932271 | gnomAD-4.0.0 | 3.18262E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71582E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.3087 | likely_benign | 0.276 | benign | -1.204 | Destabilizing | 0.797 | D | 0.653 | prob.neutral | None | None | None | None | N |
L/C | 0.5392 | ambiguous | 0.4975 | ambiguous | -0.659 | Destabilizing | 0.998 | D | 0.707 | prob.delet. | None | None | None | None | N |
L/D | 0.8105 | likely_pathogenic | 0.7742 | pathogenic | -0.639 | Destabilizing | 0.965 | D | 0.825 | deleterious | None | None | None | None | N |
L/E | 0.5429 | ambiguous | 0.4945 | ambiguous | -0.695 | Destabilizing | 0.965 | D | 0.813 | deleterious | None | None | None | None | N |
L/F | 0.175 | likely_benign | 0.1506 | benign | -0.94 | Destabilizing | 0.992 | D | 0.747 | deleterious | N | 0.469663348 | None | None | N |
L/G | 0.5625 | ambiguous | 0.5289 | ambiguous | -1.447 | Destabilizing | 0.965 | D | 0.819 | deleterious | None | None | None | None | N |
L/H | 0.3161 | likely_benign | 0.268 | benign | -0.592 | Destabilizing | 0.998 | D | 0.878 | deleterious | N | 0.472783798 | None | None | N |
L/I | 0.1533 | likely_benign | 0.1293 | benign | -0.65 | Destabilizing | 0.923 | D | 0.642 | neutral | N | 0.463969526 | None | None | N |
L/K | 0.4116 | ambiguous | 0.3662 | ambiguous | -0.754 | Destabilizing | 0.965 | D | 0.801 | deleterious | None | None | None | None | N |
L/M | 0.1366 | likely_benign | 0.1286 | benign | -0.499 | Destabilizing | 0.994 | D | 0.709 | prob.delet. | None | None | None | None | N |
L/N | 0.4452 | ambiguous | 0.4081 | ambiguous | -0.49 | Destabilizing | 0.982 | D | 0.853 | deleterious | None | None | None | None | N |
L/P | 0.1818 | likely_benign | 0.1392 | benign | -0.802 | Destabilizing | 0.041 | N | 0.695 | prob.delet. | N | 0.446770632 | None | None | N |
L/Q | 0.2145 | likely_benign | 0.1798 | benign | -0.731 | Destabilizing | 0.982 | D | 0.843 | deleterious | None | None | None | None | N |
L/R | 0.3125 | likely_benign | 0.2787 | benign | -0.093 | Destabilizing | 0.977 | D | 0.824 | deleterious | N | 0.464301212 | None | None | N |
L/S | 0.4029 | ambiguous | 0.3607 | ambiguous | -1.013 | Destabilizing | 0.965 | D | 0.802 | deleterious | None | None | None | None | N |
L/T | 0.3385 | likely_benign | 0.2899 | benign | -0.961 | Destabilizing | 0.965 | D | 0.733 | deleterious | None | None | None | None | N |
L/V | 0.144 | likely_benign | 0.1227 | benign | -0.802 | Destabilizing | 0.856 | D | 0.619 | neutral | N | 0.484227368 | None | None | N |
L/W | 0.3101 | likely_benign | 0.2791 | benign | -0.948 | Destabilizing | 0.998 | D | 0.803 | deleterious | None | None | None | None | N |
L/Y | 0.3655 | ambiguous | 0.3311 | benign | -0.739 | Destabilizing | 0.994 | D | 0.751 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.