Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30823 | 92692;92693;92694 | chr2:178549159;178549158;178549157 | chr2:179413886;179413885;179413884 |
N2AB | 29182 | 87769;87770;87771 | chr2:178549159;178549158;178549157 | chr2:179413886;179413885;179413884 |
N2A | 28255 | 84988;84989;84990 | chr2:178549159;178549158;178549157 | chr2:179413886;179413885;179413884 |
N2B | 21758 | 65497;65498;65499 | chr2:178549159;178549158;178549157 | chr2:179413886;179413885;179413884 |
Novex-1 | 21883 | 65872;65873;65874 | chr2:178549159;178549158;178549157 | chr2:179413886;179413885;179413884 |
Novex-2 | 21950 | 66073;66074;66075 | chr2:178549159;178549158;178549157 | chr2:179413886;179413885;179413884 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/S | rs727504934 | -1.093 | None | N | 0.125 | 0.143 | 0.0716867268079 | gnomAD-2.1.1 | 5.22E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 4.24864E-04 | None | 0 | 0 | 0 |
G/S | rs727504934 | -1.093 | None | N | 0.125 | 0.143 | 0.0716867268079 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 4.14766E-04 | 0 |
G/S | rs727504934 | -1.093 | None | N | 0.125 | 0.143 | 0.0716867268079 | gnomAD-4.0.0 | 3.03661E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 5.1603E-04 | 3.20246E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1063 | likely_benign | 0.1126 | benign | -0.844 | Destabilizing | 0.012 | N | 0.311 | neutral | N | 0.502687498 | None | None | I |
G/C | 0.14 | likely_benign | 0.1365 | benign | -1.139 | Destabilizing | 0.78 | D | 0.493 | neutral | D | 0.53121346 | None | None | I |
G/D | 0.3739 | ambiguous | 0.4177 | ambiguous | -1.85 | Destabilizing | 0.062 | N | 0.395 | neutral | N | 0.462449609 | None | None | I |
G/E | 0.4009 | ambiguous | 0.4427 | ambiguous | -1.878 | Destabilizing | 0.081 | N | 0.436 | neutral | None | None | None | None | I |
G/F | 0.5489 | ambiguous | 0.5749 | pathogenic | -1.098 | Destabilizing | 0.555 | D | 0.535 | neutral | None | None | None | None | I |
G/H | 0.5185 | ambiguous | 0.5399 | ambiguous | -1.452 | Destabilizing | 0.824 | D | 0.438 | neutral | None | None | None | None | I |
G/I | 0.332 | likely_benign | 0.3511 | ambiguous | -0.4 | Destabilizing | 0.38 | N | 0.499 | neutral | None | None | None | None | I |
G/K | 0.711 | likely_pathogenic | 0.7413 | pathogenic | -1.323 | Destabilizing | 0.081 | N | 0.435 | neutral | None | None | None | None | I |
G/L | 0.3131 | likely_benign | 0.3397 | benign | -0.4 | Destabilizing | 0.149 | N | 0.472 | neutral | None | None | None | None | I |
G/M | 0.3985 | ambiguous | 0.4096 | ambiguous | -0.409 | Destabilizing | 0.935 | D | 0.493 | neutral | None | None | None | None | I |
G/N | 0.3571 | ambiguous | 0.3649 | ambiguous | -1.126 | Destabilizing | 0.081 | N | 0.445 | neutral | None | None | None | None | I |
G/P | 0.8985 | likely_pathogenic | 0.9103 | pathogenic | -0.508 | Destabilizing | 0.38 | N | 0.445 | neutral | None | None | None | None | I |
G/Q | 0.5059 | ambiguous | 0.5348 | ambiguous | -1.314 | Destabilizing | 0.38 | N | 0.453 | neutral | None | None | None | None | I |
G/R | 0.5747 | likely_pathogenic | 0.6165 | pathogenic | -1.04 | Destabilizing | 0.317 | N | 0.44 | neutral | N | 0.507322307 | None | None | I |
G/S | 0.0788 | likely_benign | 0.0852 | benign | -1.343 | Destabilizing | None | N | 0.125 | neutral | N | 0.46190295 | None | None | I |
G/T | 0.1706 | likely_benign | 0.1711 | benign | -1.305 | Destabilizing | 0.002 | N | 0.34 | neutral | None | None | None | None | I |
G/V | 0.2479 | likely_benign | 0.2664 | benign | -0.508 | Destabilizing | 0.117 | N | 0.469 | neutral | N | 0.519185592 | None | None | I |
G/W | 0.5364 | ambiguous | 0.5734 | pathogenic | -1.499 | Destabilizing | 0.935 | D | 0.495 | neutral | None | None | None | None | I |
G/Y | 0.4475 | ambiguous | 0.4632 | ambiguous | -1.082 | Destabilizing | 0.555 | D | 0.515 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.