Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30826 | 92701;92702;92703 | chr2:178549150;178549149;178549148 | chr2:179413877;179413876;179413875 |
N2AB | 29185 | 87778;87779;87780 | chr2:178549150;178549149;178549148 | chr2:179413877;179413876;179413875 |
N2A | 28258 | 84997;84998;84999 | chr2:178549150;178549149;178549148 | chr2:179413877;179413876;179413875 |
N2B | 21761 | 65506;65507;65508 | chr2:178549150;178549149;178549148 | chr2:179413877;179413876;179413875 |
Novex-1 | 21886 | 65881;65882;65883 | chr2:178549150;178549149;178549148 | chr2:179413877;179413876;179413875 |
Novex-2 | 21953 | 66082;66083;66084 | chr2:178549150;178549149;178549148 | chr2:179413877;179413876;179413875 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.317 | N | 0.586 | 0.109 | 0.247322355667 | gnomAD-4.0.0 | 3.18242E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71592E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0536 | likely_benign | 0.0574 | benign | -0.591 | Destabilizing | None | N | 0.214 | neutral | N | 0.423128555 | None | None | N |
T/C | 0.2669 | likely_benign | 0.2957 | benign | -0.304 | Destabilizing | 0.824 | D | 0.526 | neutral | None | None | None | None | N |
T/D | 0.4058 | ambiguous | 0.3904 | ambiguous | -0.204 | Destabilizing | 0.081 | N | 0.559 | neutral | None | None | None | None | N |
T/E | 0.3691 | ambiguous | 0.3387 | benign | -0.219 | Destabilizing | 0.081 | N | 0.561 | neutral | None | None | None | None | N |
T/F | 0.2162 | likely_benign | 0.2425 | benign | -0.688 | Destabilizing | 0.555 | D | 0.634 | neutral | None | None | None | None | N |
T/G | 0.1162 | likely_benign | 0.1263 | benign | -0.837 | Destabilizing | 0.001 | N | 0.391 | neutral | None | None | None | None | N |
T/H | 0.2923 | likely_benign | 0.3027 | benign | -1.181 | Destabilizing | 0.824 | D | 0.614 | neutral | None | None | None | None | N |
T/I | 0.1337 | likely_benign | 0.1472 | benign | -0.032 | Destabilizing | 0.317 | N | 0.586 | neutral | N | 0.494644724 | None | None | N |
T/K | 0.31 | likely_benign | 0.2784 | benign | -0.739 | Destabilizing | 0.062 | N | 0.553 | neutral | N | 0.484561016 | None | None | N |
T/L | 0.0818 | likely_benign | 0.0858 | benign | -0.032 | Destabilizing | 0.081 | N | 0.52 | neutral | None | None | None | None | N |
T/M | 0.0806 | likely_benign | 0.084 | benign | 0.204 | Stabilizing | 0.935 | D | 0.531 | neutral | None | None | None | None | N |
T/N | 0.1078 | likely_benign | 0.1137 | benign | -0.585 | Destabilizing | 0.001 | N | 0.305 | neutral | None | None | None | None | N |
T/P | 0.1695 | likely_benign | 0.1796 | benign | -0.185 | Destabilizing | 0.317 | N | 0.575 | neutral | N | 0.521425893 | None | None | N |
T/Q | 0.2671 | likely_benign | 0.2638 | benign | -0.733 | Destabilizing | 0.38 | N | 0.579 | neutral | None | None | None | None | N |
T/R | 0.2624 | likely_benign | 0.2412 | benign | -0.52 | Destabilizing | 0.317 | N | 0.575 | neutral | N | 0.474805382 | None | None | N |
T/S | 0.0766 | likely_benign | 0.0797 | benign | -0.796 | Destabilizing | None | N | 0.177 | neutral | N | 0.422645766 | None | None | N |
T/V | 0.0928 | likely_benign | 0.0991 | benign | -0.185 | Destabilizing | 0.081 | N | 0.457 | neutral | None | None | None | None | N |
T/W | 0.5873 | likely_pathogenic | 0.61 | pathogenic | -0.682 | Destabilizing | 0.935 | D | 0.687 | prob.neutral | None | None | None | None | N |
T/Y | 0.2639 | likely_benign | 0.2788 | benign | -0.448 | Destabilizing | 0.555 | D | 0.636 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.