Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30828 | 92707;92708;92709 | chr2:178549144;178549143;178549142 | chr2:179413871;179413870;179413869 |
N2AB | 29187 | 87784;87785;87786 | chr2:178549144;178549143;178549142 | chr2:179413871;179413870;179413869 |
N2A | 28260 | 85003;85004;85005 | chr2:178549144;178549143;178549142 | chr2:179413871;179413870;179413869 |
N2B | 21763 | 65512;65513;65514 | chr2:178549144;178549143;178549142 | chr2:179413871;179413870;179413869 |
Novex-1 | 21888 | 65887;65888;65889 | chr2:178549144;178549143;178549142 | chr2:179413871;179413870;179413869 |
Novex-2 | 21955 | 66088;66089;66090 | chr2:178549144;178549143;178549142 | chr2:179413871;179413870;179413869 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.565 | N | 0.696 | 0.245 | 0.57371630461 | gnomAD-4.0.0 | 1.59119E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85793E-06 | 0 | 0 |
V/I | rs754257799 | -0.355 | 0.034 | N | 0.248 | 0.109 | 0.396494342077 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3456 | ambiguous | 0.3448 | ambiguous | -2.084 | Highly Destabilizing | 0.565 | D | 0.696 | prob.neutral | N | 0.459553502 | None | None | N |
V/C | 0.7992 | likely_pathogenic | 0.8099 | pathogenic | -1.741 | Destabilizing | 0.996 | D | 0.709 | prob.delet. | None | None | None | None | N |
V/D | 0.9591 | likely_pathogenic | 0.9563 | pathogenic | -3.088 | Highly Destabilizing | 0.901 | D | 0.825 | deleterious | N | 0.47721227 | None | None | N |
V/E | 0.9131 | likely_pathogenic | 0.9078 | pathogenic | -2.865 | Highly Destabilizing | 0.923 | D | 0.806 | deleterious | None | None | None | None | N |
V/F | 0.3967 | ambiguous | 0.4056 | ambiguous | -1.126 | Destabilizing | 0.949 | D | 0.758 | deleterious | N | 0.484179801 | None | None | N |
V/G | 0.523 | ambiguous | 0.5347 | ambiguous | -2.61 | Highly Destabilizing | 0.901 | D | 0.803 | deleterious | N | 0.489329044 | None | None | N |
V/H | 0.9656 | likely_pathogenic | 0.9645 | pathogenic | -2.5 | Highly Destabilizing | 0.996 | D | 0.815 | deleterious | None | None | None | None | N |
V/I | 0.0851 | likely_benign | 0.0866 | benign | -0.605 | Destabilizing | 0.034 | N | 0.248 | neutral | N | 0.42871052 | None | None | N |
V/K | 0.938 | likely_pathogenic | 0.9326 | pathogenic | -1.809 | Destabilizing | 0.923 | D | 0.809 | deleterious | None | None | None | None | N |
V/L | 0.2089 | likely_benign | 0.2209 | benign | -0.605 | Destabilizing | 0.349 | N | 0.689 | prob.neutral | N | 0.359263504 | None | None | N |
V/M | 0.2521 | likely_benign | 0.261 | benign | -0.799 | Destabilizing | 0.961 | D | 0.668 | neutral | None | None | None | None | N |
V/N | 0.8809 | likely_pathogenic | 0.8736 | pathogenic | -2.176 | Highly Destabilizing | 0.961 | D | 0.83 | deleterious | None | None | None | None | N |
V/P | 0.4777 | ambiguous | 0.4458 | ambiguous | -1.074 | Destabilizing | 0.024 | N | 0.579 | neutral | None | None | None | None | N |
V/Q | 0.8942 | likely_pathogenic | 0.8904 | pathogenic | -1.991 | Destabilizing | 0.961 | D | 0.801 | deleterious | None | None | None | None | N |
V/R | 0.9152 | likely_pathogenic | 0.9089 | pathogenic | -1.677 | Destabilizing | 0.961 | D | 0.83 | deleterious | None | None | None | None | N |
V/S | 0.6715 | likely_pathogenic | 0.6656 | pathogenic | -2.698 | Highly Destabilizing | 0.923 | D | 0.777 | deleterious | None | None | None | None | N |
V/T | 0.5257 | ambiguous | 0.5161 | ambiguous | -2.345 | Highly Destabilizing | 0.775 | D | 0.725 | prob.delet. | None | None | None | None | N |
V/W | 0.9655 | likely_pathogenic | 0.967 | pathogenic | -1.759 | Destabilizing | 0.996 | D | 0.783 | deleterious | None | None | None | None | N |
V/Y | 0.9008 | likely_pathogenic | 0.9041 | pathogenic | -1.389 | Destabilizing | 0.987 | D | 0.732 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.