Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30829 | 92710;92711;92712 | chr2:178549141;178549140;178549139 | chr2:179413868;179413867;179413866 |
N2AB | 29188 | 87787;87788;87789 | chr2:178549141;178549140;178549139 | chr2:179413868;179413867;179413866 |
N2A | 28261 | 85006;85007;85008 | chr2:178549141;178549140;178549139 | chr2:179413868;179413867;179413866 |
N2B | 21764 | 65515;65516;65517 | chr2:178549141;178549140;178549139 | chr2:179413868;179413867;179413866 |
Novex-1 | 21889 | 65890;65891;65892 | chr2:178549141;178549140;178549139 | chr2:179413868;179413867;179413866 |
Novex-2 | 21956 | 66091;66092;66093 | chr2:178549141;178549140;178549139 | chr2:179413868;179413867;179413866 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs764294218 | -0.262 | 0.978 | N | 0.657 | 0.3 | 0.228597637076 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
K/N | rs764294218 | -0.262 | 0.978 | N | 0.657 | 0.3 | 0.228597637076 | gnomAD-4.0.0 | 4.77351E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.57373E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4379 | ambiguous | 0.4231 | ambiguous | -0.456 | Destabilizing | 0.944 | D | 0.599 | neutral | None | None | None | None | N |
K/C | 0.6335 | likely_pathogenic | 0.6247 | pathogenic | -0.663 | Destabilizing | 0.999 | D | 0.823 | deleterious | None | None | None | None | N |
K/D | 0.7722 | likely_pathogenic | 0.7539 | pathogenic | 0.062 | Stabilizing | 0.992 | D | 0.807 | deleterious | None | None | None | None | N |
K/E | 0.347 | ambiguous | 0.3052 | benign | 0.189 | Stabilizing | 0.928 | D | 0.477 | neutral | N | 0.506899158 | None | None | N |
K/F | 0.7975 | likely_pathogenic | 0.7753 | pathogenic | -0.101 | Destabilizing | 0.999 | D | 0.816 | deleterious | None | None | None | None | N |
K/G | 0.6154 | likely_pathogenic | 0.5907 | pathogenic | -0.819 | Destabilizing | 0.983 | D | 0.734 | prob.delet. | None | None | None | None | N |
K/H | 0.2723 | likely_benign | 0.2499 | benign | -0.989 | Destabilizing | 0.998 | D | 0.775 | deleterious | None | None | None | None | N |
K/I | 0.4578 | ambiguous | 0.4405 | ambiguous | 0.48 | Stabilizing | 0.989 | D | 0.826 | deleterious | N | 0.478271773 | None | None | N |
K/L | 0.4584 | ambiguous | 0.4345 | ambiguous | 0.48 | Stabilizing | 0.983 | D | 0.734 | prob.delet. | None | None | None | None | N |
K/M | 0.2777 | likely_benign | 0.2708 | benign | 0.122 | Stabilizing | 0.999 | D | 0.775 | deleterious | None | None | None | None | N |
K/N | 0.5451 | ambiguous | 0.5121 | ambiguous | -0.486 | Destabilizing | 0.978 | D | 0.657 | neutral | N | 0.471016844 | None | None | N |
K/P | 0.9566 | likely_pathogenic | 0.9557 | pathogenic | 0.199 | Stabilizing | 0.997 | D | 0.817 | deleterious | None | None | None | None | N |
K/Q | 0.1646 | likely_benign | 0.1489 | benign | -0.474 | Destabilizing | 0.978 | D | 0.635 | neutral | N | 0.517518797 | None | None | N |
K/R | 0.0767 | likely_benign | 0.0771 | benign | -0.483 | Destabilizing | 0.085 | N | 0.331 | neutral | N | 0.452699314 | None | None | N |
K/S | 0.4921 | ambiguous | 0.4659 | ambiguous | -1.127 | Destabilizing | 0.944 | D | 0.567 | neutral | None | None | None | None | N |
K/T | 0.1972 | likely_benign | 0.1938 | benign | -0.788 | Destabilizing | 0.978 | D | 0.775 | deleterious | N | 0.504626857 | None | None | N |
K/V | 0.3945 | ambiguous | 0.387 | ambiguous | 0.199 | Stabilizing | 0.992 | D | 0.805 | deleterious | None | None | None | None | N |
K/W | 0.7712 | likely_pathogenic | 0.7474 | pathogenic | -0.012 | Destabilizing | 0.999 | D | 0.81 | deleterious | None | None | None | None | N |
K/Y | 0.6901 | likely_pathogenic | 0.6617 | pathogenic | 0.282 | Stabilizing | 0.997 | D | 0.823 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.