Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30837 | 92734;92735;92736 | chr2:178549117;178549116;178549115 | chr2:179413844;179413843;179413842 |
N2AB | 29196 | 87811;87812;87813 | chr2:178549117;178549116;178549115 | chr2:179413844;179413843;179413842 |
N2A | 28269 | 85030;85031;85032 | chr2:178549117;178549116;178549115 | chr2:179413844;179413843;179413842 |
N2B | 21772 | 65539;65540;65541 | chr2:178549117;178549116;178549115 | chr2:179413844;179413843;179413842 |
Novex-1 | 21897 | 65914;65915;65916 | chr2:178549117;178549116;178549115 | chr2:179413844;179413843;179413842 |
Novex-2 | 21964 | 66115;66116;66117 | chr2:178549117;178549116;178549115 | chr2:179413844;179413843;179413842 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | None | None | 0.014 | N | 0.187 | 0.068 | 0.104622674875 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0957 | likely_benign | 0.0932 | benign | -0.315 | Destabilizing | 0.349 | N | 0.429 | neutral | N | 0.517038794 | None | None | N |
T/C | 0.4408 | ambiguous | 0.4352 | ambiguous | -0.771 | Destabilizing | 0.996 | D | 0.702 | prob.neutral | None | None | None | None | N |
T/D | 0.5755 | likely_pathogenic | 0.5524 | ambiguous | -1.777 | Destabilizing | 0.775 | D | 0.651 | neutral | None | None | None | None | N |
T/E | 0.5625 | ambiguous | 0.5633 | ambiguous | -1.767 | Destabilizing | 0.775 | D | 0.645 | neutral | None | None | None | None | N |
T/F | 0.4029 | ambiguous | 0.3921 | ambiguous | -0.967 | Destabilizing | 0.961 | D | 0.777 | deleterious | None | None | None | None | N |
T/G | 0.2773 | likely_benign | 0.2573 | benign | -0.484 | Destabilizing | 0.633 | D | 0.621 | neutral | None | None | None | None | N |
T/H | 0.3219 | likely_benign | 0.3143 | benign | -1.025 | Destabilizing | 0.989 | D | 0.762 | deleterious | None | None | None | None | N |
T/I | 0.5672 | likely_pathogenic | 0.5807 | pathogenic | 0.037 | Stabilizing | 0.949 | D | 0.712 | prob.delet. | N | 0.493262156 | None | None | N |
T/K | 0.479 | ambiguous | 0.4882 | ambiguous | -0.414 | Destabilizing | 0.633 | D | 0.647 | neutral | None | None | None | None | N |
T/L | 0.2583 | likely_benign | 0.2558 | benign | 0.037 | Stabilizing | 0.775 | D | 0.608 | neutral | None | None | None | None | N |
T/M | 0.1218 | likely_benign | 0.1259 | benign | 0.303 | Stabilizing | 0.996 | D | 0.703 | prob.neutral | None | None | None | None | N |
T/N | 0.208 | likely_benign | 0.1968 | benign | -0.822 | Destabilizing | 0.565 | D | 0.539 | neutral | N | 0.51980974 | None | None | N |
T/P | 0.9203 | likely_pathogenic | 0.9159 | pathogenic | -0.052 | Destabilizing | 0.949 | D | 0.709 | prob.delet. | N | 0.504618461 | None | None | N |
T/Q | 0.3828 | ambiguous | 0.3838 | ambiguous | -1.153 | Destabilizing | 0.923 | D | 0.724 | prob.delet. | None | None | None | None | N |
T/R | 0.3875 | ambiguous | 0.4052 | ambiguous | -0.162 | Destabilizing | 0.923 | D | 0.72 | prob.delet. | None | None | None | None | N |
T/S | 0.0826 | likely_benign | 0.0762 | benign | -0.739 | Destabilizing | 0.014 | N | 0.187 | neutral | N | 0.365285399 | None | None | N |
T/V | 0.3499 | ambiguous | 0.3564 | ambiguous | -0.052 | Destabilizing | 0.775 | D | 0.513 | neutral | None | None | None | None | N |
T/W | 0.7274 | likely_pathogenic | 0.7214 | pathogenic | -1.103 | Destabilizing | 0.996 | D | 0.776 | deleterious | None | None | None | None | N |
T/Y | 0.4095 | ambiguous | 0.3966 | ambiguous | -0.632 | Destabilizing | 0.987 | D | 0.775 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.