Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3085 | 9478;9479;9480 | chr2:178768066;178768065;178768064 | chr2:179632793;179632792;179632791 |
N2AB | 3085 | 9478;9479;9480 | chr2:178768066;178768065;178768064 | chr2:179632793;179632792;179632791 |
N2A | 3085 | 9478;9479;9480 | chr2:178768066;178768065;178768064 | chr2:179632793;179632792;179632791 |
N2B | 3039 | 9340;9341;9342 | chr2:178768066;178768065;178768064 | chr2:179632793;179632792;179632791 |
Novex-1 | 3039 | 9340;9341;9342 | chr2:178768066;178768065;178768064 | chr2:179632793;179632792;179632791 |
Novex-2 | 3039 | 9340;9341;9342 | chr2:178768066;178768065;178768064 | chr2:179632793;179632792;179632791 |
Novex-3 | 3085 | 9478;9479;9480 | chr2:178768066;178768065;178768064 | chr2:179632793;179632792;179632791 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 0.334 | N | 0.441 | 0.406 | 0.28492961333 | gnomAD-4.0.0 | 1.20034E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31252E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.4973 | ambiguous | 0.4412 | ambiguous | -0.493 | Destabilizing | 0.549 | D | 0.501 | neutral | N | 0.506863568 | None | None | N |
D/C | 0.9331 | likely_pathogenic | 0.9253 | pathogenic | -0.308 | Destabilizing | 0.992 | D | 0.564 | neutral | None | None | None | None | N |
D/E | 0.3319 | likely_benign | 0.2924 | benign | -0.548 | Destabilizing | 0.334 | N | 0.423 | neutral | N | 0.498204138 | None | None | N |
D/F | 0.8842 | likely_pathogenic | 0.8689 | pathogenic | -0.044 | Destabilizing | 0.85 | D | 0.522 | neutral | None | None | None | None | N |
D/G | 0.3756 | ambiguous | 0.318 | benign | -0.803 | Destabilizing | 0.334 | N | 0.441 | neutral | N | 0.500512962 | None | None | N |
D/H | 0.7164 | likely_pathogenic | 0.6593 | pathogenic | -0.127 | Destabilizing | 0.009 | N | 0.342 | neutral | D | 0.57697762 | None | None | N |
D/I | 0.8676 | likely_pathogenic | 0.8442 | pathogenic | 0.313 | Stabilizing | 0.92 | D | 0.527 | neutral | None | None | None | None | N |
D/K | 0.8666 | likely_pathogenic | 0.8287 | pathogenic | -0.391 | Destabilizing | 0.617 | D | 0.472 | neutral | None | None | None | None | N |
D/L | 0.7735 | likely_pathogenic | 0.7628 | pathogenic | 0.313 | Stabilizing | 0.85 | D | 0.509 | neutral | None | None | None | None | N |
D/M | 0.8995 | likely_pathogenic | 0.8905 | pathogenic | 0.543 | Stabilizing | 0.992 | D | 0.523 | neutral | None | None | None | None | N |
D/N | 0.1772 | likely_benign | 0.161 | benign | -0.777 | Destabilizing | 0.007 | N | 0.201 | neutral | N | 0.474042299 | None | None | N |
D/P | 0.9712 | likely_pathogenic | 0.9636 | pathogenic | 0.068 | Stabilizing | 0.972 | D | 0.474 | neutral | None | None | None | None | N |
D/Q | 0.7764 | likely_pathogenic | 0.715 | pathogenic | -0.652 | Destabilizing | 0.85 | D | 0.415 | neutral | None | None | None | None | N |
D/R | 0.8737 | likely_pathogenic | 0.8333 | pathogenic | -0.071 | Destabilizing | 0.85 | D | 0.493 | neutral | None | None | None | None | N |
D/S | 0.3217 | likely_benign | 0.2773 | benign | -0.976 | Destabilizing | 0.617 | D | 0.413 | neutral | None | None | None | None | N |
D/T | 0.6417 | likely_pathogenic | 0.6019 | pathogenic | -0.73 | Destabilizing | 0.617 | D | 0.472 | neutral | None | None | None | None | N |
D/V | 0.7029 | likely_pathogenic | 0.6625 | pathogenic | 0.068 | Stabilizing | 0.896 | D | 0.523 | neutral | N | 0.511356122 | None | None | N |
D/W | 0.9841 | likely_pathogenic | 0.9799 | pathogenic | 0.152 | Stabilizing | 0.992 | D | 0.615 | neutral | None | None | None | None | N |
D/Y | 0.6119 | likely_pathogenic | 0.5732 | pathogenic | 0.181 | Stabilizing | 0.681 | D | 0.527 | neutral | D | 0.545539764 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.