Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30860 | 92803;92804;92805 | chr2:178549048;178549047;178549046 | chr2:179413775;179413774;179413773 |
N2AB | 29219 | 87880;87881;87882 | chr2:178549048;178549047;178549046 | chr2:179413775;179413774;179413773 |
N2A | 28292 | 85099;85100;85101 | chr2:178549048;178549047;178549046 | chr2:179413775;179413774;179413773 |
N2B | 21795 | 65608;65609;65610 | chr2:178549048;178549047;178549046 | chr2:179413775;179413774;179413773 |
Novex-1 | 21920 | 65983;65984;65985 | chr2:178549048;178549047;178549046 | chr2:179413775;179413774;179413773 |
Novex-2 | 21987 | 66184;66185;66186 | chr2:178549048;178549047;178549046 | chr2:179413775;179413774;179413773 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | None | None | 0.004 | N | 0.346 | 0.178 | 0.554116578535 | gnomAD-4.0.0 | 6.84174E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99428E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.571 | likely_pathogenic | 0.5433 | ambiguous | -2.093 | Highly Destabilizing | 0.4 | N | 0.737 | prob.delet. | None | None | None | None | N |
M/C | 0.7439 | likely_pathogenic | 0.729 | pathogenic | -1.943 | Destabilizing | 0.992 | D | 0.788 | deleterious | None | None | None | None | N |
M/D | 0.9833 | likely_pathogenic | 0.9763 | pathogenic | -2.089 | Highly Destabilizing | 0.972 | D | 0.839 | deleterious | None | None | None | None | N |
M/E | 0.8138 | likely_pathogenic | 0.7622 | pathogenic | -1.84 | Destabilizing | 0.972 | D | 0.813 | deleterious | None | None | None | None | N |
M/F | 0.4698 | ambiguous | 0.4011 | ambiguous | -0.712 | Destabilizing | 0.617 | D | 0.799 | deleterious | None | None | None | None | N |
M/G | 0.8278 | likely_pathogenic | 0.8195 | pathogenic | -2.574 | Highly Destabilizing | 0.92 | D | 0.814 | deleterious | None | None | None | None | N |
M/H | 0.7641 | likely_pathogenic | 0.7025 | pathogenic | -2.336 | Highly Destabilizing | 0.992 | D | 0.797 | deleterious | None | None | None | None | N |
M/I | 0.5757 | likely_pathogenic | 0.4849 | ambiguous | -0.698 | Destabilizing | 0.004 | N | 0.346 | neutral | N | 0.453928678 | None | None | N |
M/K | 0.2487 | likely_benign | 0.19 | benign | -1.268 | Destabilizing | 0.712 | D | 0.797 | deleterious | N | 0.412890132 | None | None | N |
M/L | 0.2913 | likely_benign | 0.262 | benign | -0.698 | Destabilizing | 0.016 | N | 0.459 | neutral | N | 0.498775533 | None | None | N |
M/N | 0.8565 | likely_pathogenic | 0.8111 | pathogenic | -1.723 | Destabilizing | 0.972 | D | 0.819 | deleterious | None | None | None | None | N |
M/P | 0.9979 | likely_pathogenic | 0.9974 | pathogenic | -1.148 | Destabilizing | 0.972 | D | 0.814 | deleterious | None | None | None | None | N |
M/Q | 0.3991 | ambiguous | 0.3498 | ambiguous | -1.374 | Destabilizing | 0.972 | D | 0.792 | deleterious | None | None | None | None | N |
M/R | 0.3393 | likely_benign | 0.2792 | benign | -1.459 | Destabilizing | 0.963 | D | 0.817 | deleterious | N | 0.4618948 | None | None | N |
M/S | 0.6601 | likely_pathogenic | 0.6344 | pathogenic | -2.215 | Highly Destabilizing | 0.766 | D | 0.776 | deleterious | None | None | None | None | N |
M/T | 0.4984 | ambiguous | 0.4191 | ambiguous | -1.839 | Destabilizing | 0.549 | D | 0.769 | deleterious | N | 0.519094877 | None | None | N |
M/V | 0.1979 | likely_benign | 0.172 | benign | -1.148 | Destabilizing | 0.036 | N | 0.498 | neutral | N | 0.466991189 | None | None | N |
M/W | 0.8537 | likely_pathogenic | 0.8159 | pathogenic | -1.111 | Destabilizing | 0.992 | D | 0.775 | deleterious | None | None | None | None | N |
M/Y | 0.6582 | likely_pathogenic | 0.5874 | pathogenic | -1.053 | Destabilizing | 0.92 | D | 0.824 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.