Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30874 | 92845;92846;92847 | chr2:178549006;178549005;178549004 | chr2:179413733;179413732;179413731 |
N2AB | 29233 | 87922;87923;87924 | chr2:178549006;178549005;178549004 | chr2:179413733;179413732;179413731 |
N2A | 28306 | 85141;85142;85143 | chr2:178549006;178549005;178549004 | chr2:179413733;179413732;179413731 |
N2B | 21809 | 65650;65651;65652 | chr2:178549006;178549005;178549004 | chr2:179413733;179413732;179413731 |
Novex-1 | 21934 | 66025;66026;66027 | chr2:178549006;178549005;178549004 | chr2:179413733;179413732;179413731 |
Novex-2 | 22001 | 66226;66227;66228 | chr2:178549006;178549005;178549004 | chr2:179413733;179413732;179413731 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.565 | N | 0.429 | 0.249 | 0.208816687407 | gnomAD-4.0.0 | 1.59108E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02371E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1326 | likely_benign | 0.1311 | benign | 0.016 | Stabilizing | 0.349 | N | 0.465 | neutral | N | 0.394709803 | None | None | I |
E/C | 0.8188 | likely_pathogenic | 0.8277 | pathogenic | -0.05 | Destabilizing | 0.996 | D | 0.551 | neutral | None | None | None | None | I |
E/D | 0.1034 | likely_benign | 0.1037 | benign | -0.283 | Destabilizing | 0.517 | D | 0.381 | neutral | N | 0.425992715 | None | None | I |
E/F | 0.7055 | likely_pathogenic | 0.7184 | pathogenic | -0.133 | Destabilizing | 0.987 | D | 0.494 | neutral | None | None | None | None | I |
E/G | 0.1701 | likely_benign | 0.1684 | benign | -0.078 | Destabilizing | 0.722 | D | 0.493 | neutral | N | 0.407273668 | None | None | I |
E/H | 0.4057 | ambiguous | 0.4126 | ambiguous | 0.428 | Stabilizing | 0.961 | D | 0.392 | neutral | None | None | None | None | I |
E/I | 0.3357 | likely_benign | 0.3363 | benign | 0.198 | Stabilizing | 0.961 | D | 0.493 | neutral | None | None | None | None | I |
E/K | 0.1402 | likely_benign | 0.1337 | benign | 0.452 | Stabilizing | 0.565 | D | 0.429 | neutral | N | 0.402193136 | None | None | I |
E/L | 0.3755 | ambiguous | 0.3775 | ambiguous | 0.198 | Stabilizing | 0.775 | D | 0.465 | neutral | None | None | None | None | I |
E/M | 0.4274 | ambiguous | 0.4306 | ambiguous | 0.05 | Stabilizing | 0.996 | D | 0.475 | neutral | None | None | None | None | I |
E/N | 0.2193 | likely_benign | 0.2173 | benign | 0.339 | Stabilizing | 0.875 | D | 0.399 | neutral | None | None | None | None | I |
E/P | 0.6084 | likely_pathogenic | 0.5944 | pathogenic | 0.155 | Stabilizing | 0.011 | N | 0.271 | neutral | None | None | None | None | I |
E/Q | 0.1364 | likely_benign | 0.1381 | benign | 0.323 | Stabilizing | 0.092 | N | 0.167 | neutral | N | 0.417933379 | None | None | I |
E/R | 0.2407 | likely_benign | 0.2362 | benign | 0.612 | Stabilizing | 0.775 | D | 0.407 | neutral | None | None | None | None | I |
E/S | 0.175 | likely_benign | 0.173 | benign | 0.179 | Stabilizing | 0.775 | D | 0.416 | neutral | None | None | None | None | I |
E/T | 0.1743 | likely_benign | 0.1755 | benign | 0.259 | Stabilizing | 0.775 | D | 0.475 | neutral | None | None | None | None | I |
E/V | 0.1858 | likely_benign | 0.1856 | benign | 0.155 | Stabilizing | 0.722 | D | 0.442 | neutral | N | 0.405118798 | None | None | I |
E/W | 0.8895 | likely_pathogenic | 0.8947 | pathogenic | -0.126 | Destabilizing | 0.996 | D | 0.579 | neutral | None | None | None | None | I |
E/Y | 0.5951 | likely_pathogenic | 0.5966 | pathogenic | 0.083 | Stabilizing | 0.987 | D | 0.471 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.