Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30876 | 92851;92852;92853 | chr2:178549000;178548999;178548998 | chr2:179413727;179413726;179413725 |
N2AB | 29235 | 87928;87929;87930 | chr2:178549000;178548999;178548998 | chr2:179413727;179413726;179413725 |
N2A | 28308 | 85147;85148;85149 | chr2:178549000;178548999;178548998 | chr2:179413727;179413726;179413725 |
N2B | 21811 | 65656;65657;65658 | chr2:178549000;178548999;178548998 | chr2:179413727;179413726;179413725 |
Novex-1 | 21936 | 66031;66032;66033 | chr2:178549000;178548999;178548998 | chr2:179413727;179413726;179413725 |
Novex-2 | 22003 | 66232;66233;66234 | chr2:178549000;178548999;178548998 | chr2:179413727;179413726;179413725 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | None | None | 0.681 | N | 0.528 | 0.219 | 0.632893766264 | gnomAD-4.0.0 | 6.84171E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99426E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.3366 | likely_benign | 0.2997 | benign | -1.826 | Destabilizing | 0.25 | N | 0.363 | neutral | None | None | None | None | N |
C/D | 0.7927 | likely_pathogenic | 0.6998 | pathogenic | -0.829 | Destabilizing | 0.85 | D | 0.551 | neutral | None | None | None | None | N |
C/E | 0.8439 | likely_pathogenic | 0.7661 | pathogenic | -0.639 | Destabilizing | 0.92 | D | 0.547 | neutral | None | None | None | None | N |
C/F | 0.2371 | likely_benign | 0.2003 | benign | -1.1 | Destabilizing | 0.681 | D | 0.523 | neutral | N | 0.476786895 | None | None | N |
C/G | 0.2572 | likely_benign | 0.2142 | benign | -2.19 | Highly Destabilizing | 0.004 | N | 0.429 | neutral | N | 0.390802706 | None | None | N |
C/H | 0.6289 | likely_pathogenic | 0.526 | ambiguous | -2.227 | Highly Destabilizing | 0.992 | D | 0.55 | neutral | None | None | None | None | N |
C/I | 0.3436 | ambiguous | 0.3087 | benign | -0.853 | Destabilizing | 0.447 | N | 0.445 | neutral | None | None | None | None | N |
C/K | 0.8615 | likely_pathogenic | 0.7797 | pathogenic | -1.072 | Destabilizing | 0.85 | D | 0.551 | neutral | None | None | None | None | N |
C/L | 0.3891 | ambiguous | 0.3263 | benign | -0.853 | Destabilizing | 0.25 | N | 0.417 | neutral | None | None | None | None | N |
C/M | 0.5486 | ambiguous | 0.4961 | ambiguous | 0.286 | Stabilizing | 0.92 | D | 0.531 | neutral | None | None | None | None | N |
C/N | 0.5549 | ambiguous | 0.4664 | ambiguous | -1.444 | Destabilizing | 0.85 | D | 0.559 | neutral | None | None | None | None | N |
C/P | 0.8903 | likely_pathogenic | 0.843 | pathogenic | -1.153 | Destabilizing | 0.972 | D | 0.561 | neutral | None | None | None | None | N |
C/Q | 0.7169 | likely_pathogenic | 0.6145 | pathogenic | -1.106 | Destabilizing | 0.972 | D | 0.581 | neutral | None | None | None | None | N |
C/R | 0.5803 | likely_pathogenic | 0.4653 | ambiguous | -1.238 | Destabilizing | 0.896 | D | 0.561 | neutral | N | 0.478613692 | None | None | N |
C/S | 0.28 | likely_benign | 0.2422 | benign | -1.905 | Destabilizing | 0.549 | D | 0.44 | neutral | N | 0.442594176 | None | None | N |
C/T | 0.3627 | ambiguous | 0.319 | benign | -1.513 | Destabilizing | 0.617 | D | 0.438 | neutral | None | None | None | None | N |
C/V | 0.2555 | likely_benign | 0.2351 | benign | -1.153 | Destabilizing | 0.002 | N | 0.243 | neutral | None | None | None | None | N |
C/W | 0.626 | likely_pathogenic | 0.5245 | ambiguous | -1.267 | Destabilizing | 0.009 | N | 0.366 | neutral | N | 0.473646509 | None | None | N |
C/Y | 0.3896 | ambiguous | 0.3074 | benign | -1.187 | Destabilizing | 0.681 | D | 0.528 | neutral | N | 0.463780312 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.