Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30877 | 92854;92855;92856 | chr2:178548997;178548996;178548995 | chr2:179413724;179413723;179413722 |
N2AB | 29236 | 87931;87932;87933 | chr2:178548997;178548996;178548995 | chr2:179413724;179413723;179413722 |
N2A | 28309 | 85150;85151;85152 | chr2:178548997;178548996;178548995 | chr2:179413724;179413723;179413722 |
N2B | 21812 | 65659;65660;65661 | chr2:178548997;178548996;178548995 | chr2:179413724;179413723;179413722 |
Novex-1 | 21937 | 66034;66035;66036 | chr2:178548997;178548996;178548995 | chr2:179413724;179413723;179413722 |
Novex-2 | 22004 | 66235;66236;66237 | chr2:178548997;178548996;178548995 | chr2:179413724;179413723;179413722 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | None | None | 0.81 | N | 0.508 | 0.163 | 0.254244900254 | gnomAD-4.0.0 | 3.18218E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85786E-06 | 1.43279E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1566 | likely_benign | 0.1537 | benign | -0.645 | Destabilizing | 0.334 | N | 0.436 | neutral | N | 0.419738746 | None | None | I |
V/C | 0.5782 | likely_pathogenic | 0.5984 | pathogenic | -0.59 | Destabilizing | 0.992 | D | 0.459 | neutral | None | None | None | None | I |
V/D | 0.3503 | ambiguous | 0.3142 | benign | -0.34 | Destabilizing | 0.972 | D | 0.499 | neutral | None | None | None | None | I |
V/E | 0.2702 | likely_benign | 0.257 | benign | -0.429 | Destabilizing | 0.896 | D | 0.49 | neutral | N | 0.385412742 | None | None | I |
V/F | 0.1361 | likely_benign | 0.1398 | benign | -0.725 | Destabilizing | 0.739 | D | 0.445 | neutral | None | None | None | None | I |
V/G | 0.1552 | likely_benign | 0.1487 | benign | -0.813 | Destabilizing | 0.896 | D | 0.474 | neutral | N | 0.4324974 | None | None | I |
V/H | 0.4296 | ambiguous | 0.4336 | ambiguous | -0.269 | Destabilizing | 0.992 | D | 0.505 | neutral | None | None | None | None | I |
V/I | 0.0645 | likely_benign | 0.0648 | benign | -0.339 | Destabilizing | 0.002 | N | 0.114 | neutral | None | None | None | None | I |
V/K | 0.2606 | likely_benign | 0.2589 | benign | -0.527 | Destabilizing | 0.92 | D | 0.487 | neutral | None | None | None | None | I |
V/L | 0.1162 | likely_benign | 0.1194 | benign | -0.339 | Destabilizing | 0.002 | N | 0.104 | neutral | N | 0.440788809 | None | None | I |
V/M | 0.0995 | likely_benign | 0.1118 | benign | -0.395 | Destabilizing | 0.81 | D | 0.508 | neutral | N | 0.458529208 | None | None | I |
V/N | 0.2141 | likely_benign | 0.204 | benign | -0.27 | Destabilizing | 0.972 | D | 0.495 | neutral | None | None | None | None | I |
V/P | 0.2445 | likely_benign | 0.2261 | benign | -0.406 | Destabilizing | 0.972 | D | 0.491 | neutral | None | None | None | None | I |
V/Q | 0.2315 | likely_benign | 0.2347 | benign | -0.492 | Destabilizing | 0.972 | D | 0.486 | neutral | None | None | None | None | I |
V/R | 0.2233 | likely_benign | 0.2241 | benign | 0.013 | Stabilizing | 0.92 | D | 0.495 | neutral | None | None | None | None | I |
V/S | 0.1662 | likely_benign | 0.1623 | benign | -0.665 | Destabilizing | 0.92 | D | 0.449 | neutral | None | None | None | None | I |
V/T | 0.1534 | likely_benign | 0.1592 | benign | -0.65 | Destabilizing | 0.617 | D | 0.425 | neutral | None | None | None | None | I |
V/W | 0.6443 | likely_pathogenic | 0.6791 | pathogenic | -0.81 | Destabilizing | 0.992 | D | 0.595 | neutral | None | None | None | None | I |
V/Y | 0.4145 | ambiguous | 0.437 | ambiguous | -0.521 | Destabilizing | 0.92 | D | 0.469 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.