Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30878 | 92857;92858;92859 | chr2:178548994;178548993;178548992 | chr2:179413721;179413720;179413719 |
N2AB | 29237 | 87934;87935;87936 | chr2:178548994;178548993;178548992 | chr2:179413721;179413720;179413719 |
N2A | 28310 | 85153;85154;85155 | chr2:178548994;178548993;178548992 | chr2:179413721;179413720;179413719 |
N2B | 21813 | 65662;65663;65664 | chr2:178548994;178548993;178548992 | chr2:179413721;179413720;179413719 |
Novex-1 | 21938 | 66037;66038;66039 | chr2:178548994;178548993;178548992 | chr2:179413721;179413720;179413719 |
Novex-2 | 22005 | 66238;66239;66240 | chr2:178548994;178548993;178548992 | chr2:179413721;179413720;179413719 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/I | rs1279509755 | 0.654 | 0.642 | N | 0.422 | 0.242 | 0.386882687439 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.65618E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2422 | likely_benign | 0.2576 | benign | -0.088 | Destabilizing | 0.001 | N | 0.127 | neutral | None | None | None | None | I |
K/C | 0.5795 | likely_pathogenic | 0.6269 | pathogenic | -0.345 | Destabilizing | 0.944 | D | 0.284 | neutral | None | None | None | None | I |
K/D | 0.3909 | ambiguous | 0.4096 | ambiguous | 0.017 | Stabilizing | 0.003 | N | 0.142 | neutral | None | None | None | None | I |
K/E | 0.1621 | likely_benign | 0.173 | benign | 0.074 | Stabilizing | 0.139 | N | 0.155 | neutral | N | 0.442135604 | None | None | I |
K/F | 0.6612 | likely_pathogenic | 0.7132 | pathogenic | -0.085 | Destabilizing | 0.543 | D | 0.413 | neutral | None | None | None | None | I |
K/G | 0.3214 | likely_benign | 0.3249 | benign | -0.339 | Destabilizing | 0.329 | N | 0.218 | neutral | None | None | None | None | I |
K/H | 0.2224 | likely_benign | 0.2607 | benign | -0.485 | Destabilizing | 0.007 | N | 0.169 | neutral | None | None | None | None | I |
K/I | 0.3484 | ambiguous | 0.386 | ambiguous | 0.515 | Stabilizing | 0.642 | D | 0.422 | neutral | N | 0.437519218 | None | None | I |
K/L | 0.3107 | likely_benign | 0.343 | ambiguous | 0.515 | Stabilizing | 0.495 | N | 0.227 | neutral | None | None | None | None | I |
K/M | 0.2036 | likely_benign | 0.2289 | benign | 0.043 | Stabilizing | 0.981 | D | 0.308 | neutral | None | None | None | None | I |
K/N | 0.2566 | likely_benign | 0.2707 | benign | -0.02 | Destabilizing | 0.425 | N | 0.23 | neutral | N | 0.444847835 | None | None | I |
K/P | 0.6559 | likely_pathogenic | 0.6573 | pathogenic | 0.343 | Stabilizing | 0.828 | D | 0.383 | neutral | None | None | None | None | I |
K/Q | 0.1096 | likely_benign | 0.1173 | benign | -0.068 | Destabilizing | 0.065 | N | 0.12 | neutral | N | 0.424339277 | None | None | I |
K/R | 0.0833 | likely_benign | 0.0855 | benign | -0.153 | Destabilizing | 0.425 | N | 0.275 | neutral | N | 0.456315622 | None | None | I |
K/S | 0.2852 | likely_benign | 0.3002 | benign | -0.477 | Destabilizing | 0.329 | N | 0.16 | neutral | None | None | None | None | I |
K/T | 0.1501 | likely_benign | 0.158 | benign | -0.253 | Destabilizing | 0.425 | N | 0.269 | neutral | N | 0.398304682 | None | None | I |
K/V | 0.3002 | likely_benign | 0.3363 | benign | 0.343 | Stabilizing | 0.329 | N | 0.275 | neutral | None | None | None | None | I |
K/W | 0.7086 | likely_pathogenic | 0.7577 | pathogenic | -0.126 | Destabilizing | 0.995 | D | 0.28 | neutral | None | None | None | None | I |
K/Y | 0.5072 | ambiguous | 0.5591 | ambiguous | 0.201 | Stabilizing | 0.013 | N | 0.184 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.