Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30883 | 92872;92873;92874 | chr2:178548979;178548978;178548977 | chr2:179413706;179413705;179413704 |
N2AB | 29242 | 87949;87950;87951 | chr2:178548979;178548978;178548977 | chr2:179413706;179413705;179413704 |
N2A | 28315 | 85168;85169;85170 | chr2:178548979;178548978;178548977 | chr2:179413706;179413705;179413704 |
N2B | 21818 | 65677;65678;65679 | chr2:178548979;178548978;178548977 | chr2:179413706;179413705;179413704 |
Novex-1 | 21943 | 66052;66053;66054 | chr2:178548979;178548978;178548977 | chr2:179413706;179413705;179413704 |
Novex-2 | 22010 | 66253;66254;66255 | chr2:178548979;178548978;178548977 | chr2:179413706;179413705;179413704 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.008 | N | 0.362 | 0.066 | 0.37281450598 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4266 | ambiguous | 0.4387 | ambiguous | -1.898 | Destabilizing | 0.014 | N | 0.329 | neutral | N | 0.484747142 | None | None | N |
V/C | 0.9049 | likely_pathogenic | 0.9111 | pathogenic | -1.677 | Destabilizing | 0.996 | D | 0.797 | deleterious | None | None | None | None | N |
V/D | 0.9868 | likely_pathogenic | 0.986 | pathogenic | -2.439 | Highly Destabilizing | 0.901 | D | 0.851 | deleterious | N | 0.50499099 | None | None | N |
V/E | 0.9608 | likely_pathogenic | 0.9577 | pathogenic | -2.166 | Highly Destabilizing | 0.923 | D | 0.817 | deleterious | None | None | None | None | N |
V/F | 0.6952 | likely_pathogenic | 0.6485 | pathogenic | -1.146 | Destabilizing | 0.901 | D | 0.812 | deleterious | N | 0.504417878 | None | None | N |
V/G | 0.8328 | likely_pathogenic | 0.8373 | pathogenic | -2.493 | Highly Destabilizing | 0.722 | D | 0.809 | deleterious | D | 0.555785036 | None | None | N |
V/H | 0.9854 | likely_pathogenic | 0.9842 | pathogenic | -2.383 | Highly Destabilizing | 0.996 | D | 0.855 | deleterious | None | None | None | None | N |
V/I | 0.1005 | likely_benign | 0.0964 | benign | -0.216 | Destabilizing | 0.008 | N | 0.362 | neutral | N | 0.484409087 | None | None | N |
V/K | 0.9653 | likely_pathogenic | 0.9607 | pathogenic | -1.593 | Destabilizing | 0.923 | D | 0.818 | deleterious | None | None | None | None | N |
V/L | 0.4669 | ambiguous | 0.4248 | ambiguous | -0.216 | Destabilizing | 0.156 | N | 0.679 | prob.neutral | N | 0.478063828 | None | None | N |
V/M | 0.3841 | ambiguous | 0.3636 | ambiguous | -0.426 | Destabilizing | 0.923 | D | 0.707 | prob.neutral | None | None | None | None | N |
V/N | 0.9638 | likely_pathogenic | 0.9621 | pathogenic | -2.053 | Highly Destabilizing | 0.923 | D | 0.864 | deleterious | None | None | None | None | N |
V/P | 0.9826 | likely_pathogenic | 0.9804 | pathogenic | -0.75 | Destabilizing | 0.961 | D | 0.834 | deleterious | None | None | None | None | N |
V/Q | 0.9519 | likely_pathogenic | 0.9495 | pathogenic | -1.768 | Destabilizing | 0.961 | D | 0.838 | deleterious | None | None | None | None | N |
V/R | 0.9531 | likely_pathogenic | 0.9496 | pathogenic | -1.679 | Destabilizing | 0.961 | D | 0.865 | deleterious | None | None | None | None | N |
V/S | 0.832 | likely_pathogenic | 0.8497 | pathogenic | -2.71 | Highly Destabilizing | 0.237 | N | 0.626 | neutral | None | None | None | None | N |
V/T | 0.7133 | likely_pathogenic | 0.7207 | pathogenic | -2.258 | Highly Destabilizing | 0.775 | D | 0.723 | prob.delet. | None | None | None | None | N |
V/W | 0.9936 | likely_pathogenic | 0.9933 | pathogenic | -1.651 | Destabilizing | 0.996 | D | 0.836 | deleterious | None | None | None | None | N |
V/Y | 0.9628 | likely_pathogenic | 0.9592 | pathogenic | -1.226 | Destabilizing | 0.961 | D | 0.796 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.