Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30890 | 92893;92894;92895 | chr2:178548958;178548957;178548956 | chr2:179413685;179413684;179413683 |
N2AB | 29249 | 87970;87971;87972 | chr2:178548958;178548957;178548956 | chr2:179413685;179413684;179413683 |
N2A | 28322 | 85189;85190;85191 | chr2:178548958;178548957;178548956 | chr2:179413685;179413684;179413683 |
N2B | 21825 | 65698;65699;65700 | chr2:178548958;178548957;178548956 | chr2:179413685;179413684;179413683 |
Novex-1 | 21950 | 66073;66074;66075 | chr2:178548958;178548957;178548956 | chr2:179413685;179413684;179413683 |
Novex-2 | 22017 | 66274;66275;66276 | chr2:178548958;178548957;178548956 | chr2:179413685;179413684;179413683 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.565 | N | 0.459 | 0.217 | 0.320256813643 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
E/K | None | None | 0.565 | N | 0.435 | 0.196 | 0.267755039894 | gnomAD-4.0.0 | 1.59108E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85794E-06 | 0 | 0 |
E/V | None | None | 0.82 | N | 0.453 | 0.282 | 0.387202362727 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1571 | likely_benign | 0.1463 | benign | -0.791 | Destabilizing | 0.008 | N | 0.225 | neutral | N | 0.41754659 | None | None | N |
E/C | 0.7795 | likely_pathogenic | 0.7667 | pathogenic | -0.516 | Destabilizing | 0.989 | D | 0.629 | neutral | None | None | None | None | N |
E/D | 0.1732 | likely_benign | 0.1703 | benign | -1.075 | Destabilizing | 0.722 | D | 0.429 | neutral | N | 0.492103064 | None | None | N |
E/F | 0.7808 | likely_pathogenic | 0.7651 | pathogenic | -0.157 | Destabilizing | 0.961 | D | 0.61 | neutral | None | None | None | None | N |
E/G | 0.2028 | likely_benign | 0.188 | benign | -1.15 | Destabilizing | 0.565 | D | 0.459 | neutral | N | 0.490833628 | None | None | N |
E/H | 0.5019 | ambiguous | 0.4631 | ambiguous | -0.378 | Destabilizing | 0.961 | D | 0.439 | neutral | None | None | None | None | N |
E/I | 0.4122 | ambiguous | 0.3735 | ambiguous | 0.187 | Stabilizing | 0.923 | D | 0.599 | neutral | None | None | None | None | N |
E/K | 0.1818 | likely_benign | 0.1515 | benign | -0.677 | Destabilizing | 0.565 | D | 0.435 | neutral | N | 0.457219699 | None | None | N |
E/L | 0.4408 | ambiguous | 0.3964 | ambiguous | 0.187 | Stabilizing | 0.858 | D | 0.524 | neutral | None | None | None | None | N |
E/M | 0.431 | ambiguous | 0.4041 | ambiguous | 0.524 | Stabilizing | 0.989 | D | 0.544 | neutral | None | None | None | None | N |
E/N | 0.2879 | likely_benign | 0.2566 | benign | -1.112 | Destabilizing | 0.923 | D | 0.448 | neutral | None | None | None | None | N |
E/P | 0.9437 | likely_pathogenic | 0.9425 | pathogenic | -0.118 | Destabilizing | 0.961 | D | 0.439 | neutral | None | None | None | None | N |
E/Q | 0.1421 | likely_benign | 0.1255 | benign | -0.976 | Destabilizing | 0.034 | N | 0.17 | neutral | N | 0.4189521 | None | None | N |
E/R | 0.3057 | likely_benign | 0.2658 | benign | -0.32 | Destabilizing | 0.858 | D | 0.442 | neutral | None | None | None | None | N |
E/S | 0.2103 | likely_benign | 0.1878 | benign | -1.409 | Destabilizing | 0.633 | D | 0.411 | neutral | None | None | None | None | N |
E/T | 0.2348 | likely_benign | 0.2026 | benign | -1.117 | Destabilizing | 0.775 | D | 0.393 | neutral | None | None | None | None | N |
E/V | 0.232 | likely_benign | 0.2117 | benign | -0.118 | Destabilizing | 0.82 | D | 0.453 | neutral | N | 0.419586818 | None | None | N |
E/W | 0.9139 | likely_pathogenic | 0.9064 | pathogenic | 0.103 | Stabilizing | 0.996 | D | 0.62 | neutral | None | None | None | None | N |
E/Y | 0.6664 | likely_pathogenic | 0.6351 | pathogenic | 0.084 | Stabilizing | 0.961 | D | 0.543 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.