Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30904 | 92935;92936;92937 | chr2:178548916;178548915;178548914 | chr2:179413643;179413642;179413641 |
N2AB | 29263 | 88012;88013;88014 | chr2:178548916;178548915;178548914 | chr2:179413643;179413642;179413641 |
N2A | 28336 | 85231;85232;85233 | chr2:178548916;178548915;178548914 | chr2:179413643;179413642;179413641 |
N2B | 21839 | 65740;65741;65742 | chr2:178548916;178548915;178548914 | chr2:179413643;179413642;179413641 |
Novex-1 | 21964 | 66115;66116;66117 | chr2:178548916;178548915;178548914 | chr2:179413643;179413642;179413641 |
Novex-2 | 22031 | 66316;66317;66318 | chr2:178548916;178548915;178548914 | chr2:179413643;179413642;179413641 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs370265204 | 0.476 | 0.046 | N | 0.265 | 0.161 | None | gnomAD-2.1.1 | 2.85E-05 | None | None | None | None | I | None | 3.30579E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/E | rs370265204 | 0.476 | 0.046 | N | 0.265 | 0.161 | None | gnomAD-3.1.2 | 7.88E-05 | None | None | None | None | I | None | 2.89394E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/E | rs370265204 | 0.476 | 0.046 | N | 0.265 | 0.161 | None | 1000 genomes | 1.99681E-04 | None | None | None | None | I | None | 8E-04 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
K/E | rs370265204 | 0.476 | 0.046 | N | 0.265 | 0.161 | None | gnomAD-4.0.0 | 2.5404E-05 | None | None | None | None | I | None | 4.79616E-04 | 1.66617E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 6.40184E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2544 | likely_benign | 0.2685 | benign | -0.176 | Destabilizing | 0.919 | D | 0.609 | neutral | None | None | None | None | I |
K/C | 0.56 | ambiguous | 0.577 | pathogenic | -0.361 | Destabilizing | 0.999 | D | 0.778 | deleterious | None | None | None | None | I |
K/D | 0.6367 | likely_pathogenic | 0.6336 | pathogenic | 0.354 | Stabilizing | 0.851 | D | 0.627 | neutral | None | None | None | None | I |
K/E | 0.1451 | likely_benign | 0.1666 | benign | 0.398 | Stabilizing | 0.046 | N | 0.265 | neutral | N | 0.379681635 | None | None | I |
K/F | 0.6362 | likely_pathogenic | 0.655 | pathogenic | -0.241 | Destabilizing | 0.996 | D | 0.759 | deleterious | None | None | None | None | I |
K/G | 0.4702 | ambiguous | 0.4956 | ambiguous | -0.426 | Destabilizing | 0.959 | D | 0.724 | prob.delet. | None | None | None | None | I |
K/H | 0.3295 | likely_benign | 0.3338 | benign | -0.667 | Destabilizing | 0.988 | D | 0.701 | prob.neutral | None | None | None | None | I |
K/I | 0.2209 | likely_benign | 0.2221 | benign | 0.415 | Stabilizing | 0.984 | D | 0.764 | deleterious | N | 0.396576672 | None | None | I |
K/L | 0.249 | likely_benign | 0.2567 | benign | 0.415 | Stabilizing | 0.919 | D | 0.731 | prob.delet. | None | None | None | None | I |
K/M | 0.1701 | likely_benign | 0.1716 | benign | 0.199 | Stabilizing | 0.999 | D | 0.69 | prob.neutral | None | None | None | None | I |
K/N | 0.4502 | ambiguous | 0.453 | ambiguous | 0.125 | Stabilizing | 0.896 | D | 0.647 | neutral | N | 0.446522703 | None | None | I |
K/P | 0.4695 | ambiguous | 0.4816 | ambiguous | 0.248 | Stabilizing | 0.996 | D | 0.719 | prob.delet. | None | None | None | None | I |
K/Q | 0.1239 | likely_benign | 0.1304 | benign | -0.009 | Destabilizing | 0.437 | N | 0.301 | neutral | N | 0.39272829 | None | None | I |
K/R | 0.0809 | likely_benign | 0.0809 | benign | -0.074 | Destabilizing | 0.026 | N | 0.301 | neutral | N | 0.400521054 | None | None | I |
K/S | 0.3826 | ambiguous | 0.4045 | ambiguous | -0.501 | Destabilizing | 0.919 | D | 0.598 | neutral | None | None | None | None | I |
K/T | 0.1533 | likely_benign | 0.1567 | benign | -0.28 | Destabilizing | 0.946 | D | 0.69 | prob.neutral | N | 0.394075085 | None | None | I |
K/V | 0.2148 | likely_benign | 0.2162 | benign | 0.248 | Stabilizing | 0.988 | D | 0.723 | prob.delet. | None | None | None | None | I |
K/W | 0.6779 | likely_pathogenic | 0.6884 | pathogenic | -0.179 | Destabilizing | 0.999 | D | 0.768 | deleterious | None | None | None | None | I |
K/Y | 0.5294 | ambiguous | 0.5441 | ambiguous | 0.157 | Stabilizing | 0.996 | D | 0.761 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.