Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC3090492935;92936;92937 chr2:178548916;178548915;178548914chr2:179413643;179413642;179413641
N2AB2926388012;88013;88014 chr2:178548916;178548915;178548914chr2:179413643;179413642;179413641
N2A2833685231;85232;85233 chr2:178548916;178548915;178548914chr2:179413643;179413642;179413641
N2B2183965740;65741;65742 chr2:178548916;178548915;178548914chr2:179413643;179413642;179413641
Novex-12196466115;66116;66117 chr2:178548916;178548915;178548914chr2:179413643;179413642;179413641
Novex-22203166316;66317;66318 chr2:178548916;178548915;178548914chr2:179413643;179413642;179413641
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: K
  • RefSeq wild type transcript codon: AAA
  • RefSeq wild type template codon: TTT
  • Domain: Fn3-113
  • Domain position: 84
  • Structural Position: 117
  • Q(SASA): 0.5669
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
K/E rs370265204 0.476 0.046 N 0.265 0.161 None gnomAD-2.1.1 2.85E-05 None None None None I None 3.30579E-04 0 None 0 0 None 0 None 0 0 0
K/E rs370265204 0.476 0.046 N 0.265 0.161 None gnomAD-3.1.2 7.88E-05 None None None None I None 2.89394E-04 0 0 0 0 None 0 0 0 0 0
K/E rs370265204 0.476 0.046 N 0.265 0.161 None 1000 genomes 1.99681E-04 None None None None I None 8E-04 0 None None 0 0 None None None 0 None
K/E rs370265204 0.476 0.046 N 0.265 0.161 None gnomAD-4.0.0 2.5404E-05 None None None None I None 4.79616E-04 1.66617E-05 None 0 0 None 0 0 0 0 6.40184E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
K/A 0.2544 likely_benign 0.2685 benign -0.176 Destabilizing 0.919 D 0.609 neutral None None None None I
K/C 0.56 ambiguous 0.577 pathogenic -0.361 Destabilizing 0.999 D 0.778 deleterious None None None None I
K/D 0.6367 likely_pathogenic 0.6336 pathogenic 0.354 Stabilizing 0.851 D 0.627 neutral None None None None I
K/E 0.1451 likely_benign 0.1666 benign 0.398 Stabilizing 0.046 N 0.265 neutral N 0.379681635 None None I
K/F 0.6362 likely_pathogenic 0.655 pathogenic -0.241 Destabilizing 0.996 D 0.759 deleterious None None None None I
K/G 0.4702 ambiguous 0.4956 ambiguous -0.426 Destabilizing 0.959 D 0.724 prob.delet. None None None None I
K/H 0.3295 likely_benign 0.3338 benign -0.667 Destabilizing 0.988 D 0.701 prob.neutral None None None None I
K/I 0.2209 likely_benign 0.2221 benign 0.415 Stabilizing 0.984 D 0.764 deleterious N 0.396576672 None None I
K/L 0.249 likely_benign 0.2567 benign 0.415 Stabilizing 0.919 D 0.731 prob.delet. None None None None I
K/M 0.1701 likely_benign 0.1716 benign 0.199 Stabilizing 0.999 D 0.69 prob.neutral None None None None I
K/N 0.4502 ambiguous 0.453 ambiguous 0.125 Stabilizing 0.896 D 0.647 neutral N 0.446522703 None None I
K/P 0.4695 ambiguous 0.4816 ambiguous 0.248 Stabilizing 0.996 D 0.719 prob.delet. None None None None I
K/Q 0.1239 likely_benign 0.1304 benign -0.009 Destabilizing 0.437 N 0.301 neutral N 0.39272829 None None I
K/R 0.0809 likely_benign 0.0809 benign -0.074 Destabilizing 0.026 N 0.301 neutral N 0.400521054 None None I
K/S 0.3826 ambiguous 0.4045 ambiguous -0.501 Destabilizing 0.919 D 0.598 neutral None None None None I
K/T 0.1533 likely_benign 0.1567 benign -0.28 Destabilizing 0.946 D 0.69 prob.neutral N 0.394075085 None None I
K/V 0.2148 likely_benign 0.2162 benign 0.248 Stabilizing 0.988 D 0.723 prob.delet. None None None None I
K/W 0.6779 likely_pathogenic 0.6884 pathogenic -0.179 Destabilizing 0.999 D 0.768 deleterious None None None None I
K/Y 0.5294 ambiguous 0.5441 ambiguous 0.157 Stabilizing 0.996 D 0.761 deleterious None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.