Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30905 | 92938;92939;92940 | chr2:178548913;178548912;178548911 | chr2:179413640;179413639;179413638 |
N2AB | 29264 | 88015;88016;88017 | chr2:178548913;178548912;178548911 | chr2:179413640;179413639;179413638 |
N2A | 28337 | 85234;85235;85236 | chr2:178548913;178548912;178548911 | chr2:179413640;179413639;179413638 |
N2B | 21840 | 65743;65744;65745 | chr2:178548913;178548912;178548911 | chr2:179413640;179413639;179413638 |
Novex-1 | 21965 | 66118;66119;66120 | chr2:178548913;178548912;178548911 | chr2:179413640;179413639;179413638 |
Novex-2 | 22032 | 66319;66320;66321 | chr2:178548913;178548912;178548911 | chr2:179413640;179413639;179413638 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/V | rs1698268798 | None | 1.0 | D | 0.939 | 0.683 | 0.772147790219 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
G/V | rs1698268798 | None | 1.0 | D | 0.939 | 0.683 | 0.772147790219 | gnomAD-4.0.0 | 2.56197E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.78549E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.4991 | ambiguous | 0.4976 | ambiguous | -0.742 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | D | 0.539071636 | None | None | N |
G/C | 0.8645 | likely_pathogenic | 0.8761 | pathogenic | -1.113 | Destabilizing | 1.0 | D | 0.891 | deleterious | D | 0.539578615 | None | None | N |
G/D | 0.9507 | likely_pathogenic | 0.9526 | pathogenic | -1.208 | Destabilizing | 1.0 | D | 0.916 | deleterious | D | 0.538564657 | None | None | N |
G/E | 0.9648 | likely_pathogenic | 0.967 | pathogenic | -1.314 | Destabilizing | 1.0 | D | 0.945 | deleterious | None | None | None | None | N |
G/F | 0.994 | likely_pathogenic | 0.9942 | pathogenic | -1.253 | Destabilizing | 1.0 | D | 0.919 | deleterious | None | None | None | None | N |
G/H | 0.9849 | likely_pathogenic | 0.9857 | pathogenic | -1.041 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
G/I | 0.9852 | likely_pathogenic | 0.9848 | pathogenic | -0.59 | Destabilizing | 1.0 | D | 0.929 | deleterious | None | None | None | None | N |
G/K | 0.9913 | likely_pathogenic | 0.9912 | pathogenic | -1.079 | Destabilizing | 1.0 | D | 0.945 | deleterious | None | None | None | None | N |
G/L | 0.9809 | likely_pathogenic | 0.9813 | pathogenic | -0.59 | Destabilizing | 1.0 | D | 0.933 | deleterious | None | None | None | None | N |
G/M | 0.9813 | likely_pathogenic | 0.9821 | pathogenic | -0.513 | Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
G/N | 0.9471 | likely_pathogenic | 0.95 | pathogenic | -0.782 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
G/P | 0.9979 | likely_pathogenic | 0.9981 | pathogenic | -0.604 | Destabilizing | 1.0 | D | 0.941 | deleterious | None | None | None | None | N |
G/Q | 0.9791 | likely_pathogenic | 0.9797 | pathogenic | -1.087 | Destabilizing | 1.0 | D | 0.935 | deleterious | None | None | None | None | N |
G/R | 0.9792 | likely_pathogenic | 0.9795 | pathogenic | -0.67 | Destabilizing | 1.0 | D | 0.947 | deleterious | D | 0.539071636 | None | None | N |
G/S | 0.2266 | likely_benign | 0.2361 | benign | -1.012 | Destabilizing | 1.0 | D | 0.835 | deleterious | N | 0.431368744 | None | None | N |
G/T | 0.7876 | likely_pathogenic | 0.7913 | pathogenic | -1.052 | Destabilizing | 1.0 | D | 0.936 | deleterious | None | None | None | None | N |
G/V | 0.9595 | likely_pathogenic | 0.9596 | pathogenic | -0.604 | Destabilizing | 1.0 | D | 0.939 | deleterious | D | 0.528475799 | None | None | N |
G/W | 0.9827 | likely_pathogenic | 0.9847 | pathogenic | -1.435 | Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | N |
G/Y | 0.9862 | likely_pathogenic | 0.9871 | pathogenic | -1.073 | Destabilizing | 1.0 | D | 0.91 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.