Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30908 | 92947;92948;92949 | chr2:178548904;178548903;178548902 | chr2:179413631;179413630;179413629 |
N2AB | 29267 | 88024;88025;88026 | chr2:178548904;178548903;178548902 | chr2:179413631;179413630;179413629 |
N2A | 28340 | 85243;85244;85245 | chr2:178548904;178548903;178548902 | chr2:179413631;179413630;179413629 |
N2B | 21843 | 65752;65753;65754 | chr2:178548904;178548903;178548902 | chr2:179413631;179413630;179413629 |
Novex-1 | 21968 | 66127;66128;66129 | chr2:178548904;178548903;178548902 | chr2:179413631;179413630;179413629 |
Novex-2 | 22035 | 66328;66329;66330 | chr2:178548904;178548903;178548902 | chr2:179413631;179413630;179413629 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | None | None | 0.303 | N | 0.634 | 0.248 | 0.437527004654 | gnomAD-4.0.0 | 1.5912E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85789E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.1533 | likely_benign | 0.1412 | benign | -1.317 | Destabilizing | 0.007 | N | 0.331 | neutral | None | None | None | None | I |
C/D | 0.4374 | ambiguous | 0.4188 | ambiguous | -0.306 | Destabilizing | 0.039 | N | 0.653 | prob.neutral | None | None | None | None | I |
C/E | 0.5509 | ambiguous | 0.5499 | ambiguous | -0.227 | Destabilizing | 0.039 | N | 0.649 | prob.neutral | None | None | None | None | I |
C/F | 0.1463 | likely_benign | 0.1369 | benign | -0.919 | Destabilizing | 0.303 | N | 0.639 | neutral | N | 0.484931084 | None | None | I |
C/G | 0.105 | likely_benign | 0.095 | benign | -1.593 | Destabilizing | 0.012 | N | 0.563 | neutral | N | 0.403776711 | None | None | I |
C/H | 0.2822 | likely_benign | 0.2774 | benign | -1.837 | Destabilizing | 0.685 | D | 0.74 | deleterious | None | None | None | None | I |
C/I | 0.2937 | likely_benign | 0.2751 | benign | -0.63 | Destabilizing | 0.075 | N | 0.545 | neutral | None | None | None | None | I |
C/K | 0.4587 | ambiguous | 0.4731 | ambiguous | -0.587 | Destabilizing | 0.039 | N | 0.653 | prob.neutral | None | None | None | None | I |
C/L | 0.2773 | likely_benign | 0.258 | benign | -0.63 | Destabilizing | 0.032 | N | 0.505 | neutral | None | None | None | None | I |
C/M | 0.3842 | ambiguous | 0.3634 | ambiguous | -0.067 | Destabilizing | 0.637 | D | 0.545 | neutral | None | None | None | None | I |
C/N | 0.2483 | likely_benign | 0.2321 | benign | -0.516 | Destabilizing | 0.039 | N | 0.653 | prob.neutral | None | None | None | None | I |
C/P | 0.8419 | likely_pathogenic | 0.8224 | pathogenic | -0.832 | Destabilizing | 0.221 | N | 0.695 | prob.delet. | None | None | None | None | I |
C/Q | 0.3361 | likely_benign | 0.3277 | benign | -0.504 | Destabilizing | 0.221 | N | 0.716 | prob.delet. | None | None | None | None | I |
C/R | 0.2015 | likely_benign | 0.2153 | benign | -0.557 | Destabilizing | 0.177 | N | 0.689 | prob.delet. | N | 0.385903027 | None | None | I |
C/S | 0.1023 | likely_benign | 0.0932 | benign | -0.987 | Destabilizing | None | N | 0.329 | neutral | N | 0.262098663 | None | None | I |
C/T | 0.1767 | likely_benign | 0.16 | benign | -0.737 | Destabilizing | 0.016 | N | 0.469 | neutral | None | None | None | None | I |
C/V | 0.2267 | likely_benign | 0.2216 | benign | -0.832 | Destabilizing | 0.075 | N | 0.583 | neutral | None | None | None | None | I |
C/W | 0.3788 | ambiguous | 0.3656 | ambiguous | -0.965 | Destabilizing | 0.833 | D | 0.716 | prob.delet. | N | 0.485451159 | None | None | I |
C/Y | 0.2007 | likely_benign | 0.1895 | benign | -0.85 | Destabilizing | 0.303 | N | 0.634 | neutral | N | 0.466075964 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.