Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30909 | 92950;92951;92952 | chr2:178548901;178548900;178548899 | chr2:179413628;179413627;179413626 |
N2AB | 29268 | 88027;88028;88029 | chr2:178548901;178548900;178548899 | chr2:179413628;179413627;179413626 |
N2A | 28341 | 85246;85247;85248 | chr2:178548901;178548900;178548899 | chr2:179413628;179413627;179413626 |
N2B | 21844 | 65755;65756;65757 | chr2:178548901;178548900;178548899 | chr2:179413628;179413627;179413626 |
Novex-1 | 21969 | 66130;66131;66132 | chr2:178548901;178548900;178548899 | chr2:179413628;179413627;179413626 |
Novex-2 | 22036 | 66331;66332;66333 | chr2:178548901;178548900;178548899 | chr2:179413628;179413627;179413626 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1486624506 | None | 0.935 | N | 0.509 | 0.22 | 0.241664281697 | gnomAD-4.0.0 | 6.84199E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65662E-05 |
E/Q | rs1486624506 | -0.82 | 0.994 | N | 0.508 | 0.171 | 0.167679373172 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/Q | rs1486624506 | -0.82 | 0.994 | N | 0.508 | 0.171 | 0.167679373172 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs1486624506 | -0.82 | 0.994 | N | 0.508 | 0.171 | 0.167679373172 | gnomAD-4.0.0 | 3.09835E-06 | None | None | None | None | N | None | 0 | 8.33444E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.162 | likely_benign | 0.1558 | benign | -0.87 | Destabilizing | 0.78 | D | 0.527 | neutral | N | 0.480778844 | None | None | N |
E/C | 0.8063 | likely_pathogenic | 0.7965 | pathogenic | -0.456 | Destabilizing | 0.999 | D | 0.659 | prob.neutral | None | None | None | None | N |
E/D | 0.1367 | likely_benign | 0.1419 | benign | -0.978 | Destabilizing | 0.978 | D | 0.532 | neutral | N | 0.458902062 | None | None | N |
E/F | 0.6814 | likely_pathogenic | 0.6736 | pathogenic | -0.174 | Destabilizing | 0.971 | D | 0.683 | prob.neutral | None | None | None | None | N |
E/G | 0.2403 | likely_benign | 0.2359 | benign | -1.236 | Destabilizing | 0.981 | D | 0.599 | neutral | N | 0.513968698 | None | None | N |
E/H | 0.465 | ambiguous | 0.4513 | ambiguous | -0.318 | Destabilizing | 0.999 | D | 0.508 | neutral | None | None | None | None | N |
E/I | 0.2933 | likely_benign | 0.2861 | benign | 0.129 | Stabilizing | 0.825 | D | 0.644 | neutral | None | None | None | None | N |
E/K | 0.1869 | likely_benign | 0.181 | benign | -0.458 | Destabilizing | 0.935 | D | 0.509 | neutral | N | 0.488936968 | None | None | N |
E/L | 0.3215 | likely_benign | 0.3146 | benign | 0.129 | Stabilizing | 0.825 | D | 0.619 | neutral | None | None | None | None | N |
E/M | 0.3643 | ambiguous | 0.359 | ambiguous | 0.494 | Stabilizing | 0.996 | D | 0.623 | neutral | None | None | None | None | N |
E/N | 0.2786 | likely_benign | 0.2779 | benign | -1.028 | Destabilizing | 0.995 | D | 0.461 | neutral | None | None | None | None | N |
E/P | 0.4746 | ambiguous | 0.4767 | ambiguous | -0.183 | Destabilizing | 0.995 | D | 0.498 | neutral | None | None | None | None | N |
E/Q | 0.1643 | likely_benign | 0.1596 | benign | -0.885 | Destabilizing | 0.994 | D | 0.508 | neutral | N | 0.499519321 | None | None | N |
E/R | 0.3238 | likely_benign | 0.3063 | benign | -0.115 | Destabilizing | 0.985 | D | 0.467 | neutral | None | None | None | None | N |
E/S | 0.2163 | likely_benign | 0.2115 | benign | -1.315 | Destabilizing | 0.95 | D | 0.499 | neutral | None | None | None | None | N |
E/T | 0.2069 | likely_benign | 0.1972 | benign | -1.005 | Destabilizing | 0.904 | D | 0.531 | neutral | None | None | None | None | N |
E/V | 0.1794 | likely_benign | 0.1758 | benign | -0.183 | Destabilizing | 0.022 | N | 0.558 | neutral | N | 0.510891108 | None | None | N |
E/W | 0.8909 | likely_pathogenic | 0.8877 | pathogenic | 0.152 | Stabilizing | 0.999 | D | 0.591 | neutral | None | None | None | None | N |
E/Y | 0.598 | likely_pathogenic | 0.5939 | pathogenic | 0.106 | Stabilizing | 0.985 | D | 0.655 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.