Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30918 | 92977;92978;92979 | chr2:178548874;178548873;178548872 | chr2:179413601;179413600;179413599 |
N2AB | 29277 | 88054;88055;88056 | chr2:178548874;178548873;178548872 | chr2:179413601;179413600;179413599 |
N2A | 28350 | 85273;85274;85275 | chr2:178548874;178548873;178548872 | chr2:179413601;179413600;179413599 |
N2B | 21853 | 65782;65783;65784 | chr2:178548874;178548873;178548872 | chr2:179413601;179413600;179413599 |
Novex-1 | 21978 | 66157;66158;66159 | chr2:178548874;178548873;178548872 | chr2:179413601;179413600;179413599 |
Novex-2 | 22045 | 66358;66359;66360 | chr2:178548874;178548873;178548872 | chr2:179413601;179413600;179413599 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/Y | rs781654770 | 0.12 | 1.0 | N | 0.831 | 0.58 | 0.73377832567 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.77E-05 | 0 |
D/Y | rs781654770 | 0.12 | 1.0 | N | 0.831 | 0.58 | 0.73377832567 | gnomAD-4.0.0 | 6.1582E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.09497E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.7565 | likely_pathogenic | 0.7302 | pathogenic | 0.05 | Stabilizing | 1.0 | D | 0.746 | deleterious | N | 0.486993607 | None | None | N |
D/C | 0.9523 | likely_pathogenic | 0.9454 | pathogenic | 0.03 | Stabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
D/E | 0.3372 | likely_benign | 0.3018 | benign | -0.214 | Destabilizing | 0.999 | D | 0.464 | neutral | N | 0.412015845 | None | None | N |
D/F | 0.9724 | likely_pathogenic | 0.9676 | pathogenic | -0.042 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
D/G | 0.7769 | likely_pathogenic | 0.7502 | pathogenic | -0.062 | Destabilizing | 1.0 | D | 0.797 | deleterious | D | 0.529131018 | None | None | N |
D/H | 0.8684 | likely_pathogenic | 0.8515 | pathogenic | 0.412 | Stabilizing | 1.0 | D | 0.898 | deleterious | N | 0.487855149 | None | None | N |
D/I | 0.9449 | likely_pathogenic | 0.9388 | pathogenic | 0.278 | Stabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
D/K | 0.9388 | likely_pathogenic | 0.9301 | pathogenic | 0.565 | Stabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
D/L | 0.9067 | likely_pathogenic | 0.8959 | pathogenic | 0.278 | Stabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
D/M | 0.9743 | likely_pathogenic | 0.972 | pathogenic | 0.168 | Stabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
D/N | 0.4567 | ambiguous | 0.4468 | ambiguous | 0.325 | Stabilizing | 1.0 | D | 0.791 | deleterious | N | 0.517836589 | None | None | N |
D/P | 0.9109 | likely_pathogenic | 0.889 | pathogenic | 0.221 | Stabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
D/Q | 0.8545 | likely_pathogenic | 0.8377 | pathogenic | 0.334 | Stabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
D/R | 0.9386 | likely_pathogenic | 0.9311 | pathogenic | 0.687 | Stabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
D/S | 0.5917 | likely_pathogenic | 0.5662 | pathogenic | 0.248 | Stabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
D/T | 0.8691 | likely_pathogenic | 0.8564 | pathogenic | 0.344 | Stabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
D/V | 0.8529 | likely_pathogenic | 0.8367 | pathogenic | 0.221 | Stabilizing | 1.0 | D | 0.792 | deleterious | N | 0.499718434 | None | None | N |
D/W | 0.9922 | likely_pathogenic | 0.9913 | pathogenic | -0.005 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
D/Y | 0.8278 | likely_pathogenic | 0.8042 | pathogenic | 0.181 | Stabilizing | 1.0 | D | 0.831 | deleterious | N | 0.500225413 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.