Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30927 | 93004;93005;93006 | chr2:178548847;178548846;178548845 | chr2:179413574;179413573;179413572 |
N2AB | 29286 | 88081;88082;88083 | chr2:178548847;178548846;178548845 | chr2:179413574;179413573;179413572 |
N2A | 28359 | 85300;85301;85302 | chr2:178548847;178548846;178548845 | chr2:179413574;179413573;179413572 |
N2B | 21862 | 65809;65810;65811 | chr2:178548847;178548846;178548845 | chr2:179413574;179413573;179413572 |
Novex-1 | 21987 | 66184;66185;66186 | chr2:178548847;178548846;178548845 | chr2:179413574;179413573;179413572 |
Novex-2 | 22054 | 66385;66386;66387 | chr2:178548847;178548846;178548845 | chr2:179413574;179413573;179413572 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/K | rs531432790 | -0.978 | 0.999 | N | 0.635 | 0.564 | 0.836495694078 | gnomAD-2.1.1 | 6.31765E-04 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 4.73825E-03 | None | 0 | 7.1E-05 | 4.96853E-04 |
I/K | rs531432790 | -0.978 | 0.999 | N | 0.635 | 0.564 | 0.836495694078 | gnomAD-3.1.2 | 1.97166E-04 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 6.00663E-03 | 0 |
I/K | rs531432790 | -0.978 | 0.999 | N | 0.635 | 0.564 | 0.836495694078 | 1000 genomes | 7.98722E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 0 | 0 | None | None | None | 4.1E-03 | None |
I/K | rs531432790 | -0.978 | 0.999 | N | 0.635 | 0.564 | 0.836495694078 | gnomAD-4.0.0 | 3.22298E-04 | None | None | None | None | N | None | 1.3328E-05 | 4.99917E-05 | None | 0 | 0 | None | 0 | 0 | 2.88181E-05 | 5.05039E-03 | 3.52113E-04 |
I/L | rs1416836304 | None | 0.104 | N | 0.209 | 0.16 | 0.188950314367 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/L | rs1416836304 | None | 0.104 | N | 0.209 | 0.16 | 0.188950314367 | gnomAD-4.0.0 | 6.57091E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46977E-05 | 0 | 0 |
I/M | None | None | 0.997 | N | 0.451 | 0.306 | 0.202086224978 | gnomAD-4.0.0 | 4.77716E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71615E-06 | 0 | 3.02425E-05 |
I/T | None | None | 0.998 | N | 0.457 | 0.476 | 0.674404827817 | gnomAD-4.0.0 | 6.15957E-06 | None | None | None | None | N | None | 5.9755E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79889E-06 | 5.79656E-05 | 0 |
I/V | rs1416836304 | -1.067 | 0.889 | N | 0.279 | 0.176 | 0.395143324098 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.11532E-04 | None | 0 | None | 0 | 0 | 0 |
I/V | rs1416836304 | -1.067 | 0.889 | N | 0.279 | 0.176 | 0.395143324098 | gnomAD-4.0.0 | 3.18457E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.54877E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.3713 | ambiguous | 0.2776 | benign | -0.871 | Destabilizing | 0.996 | D | 0.391 | neutral | None | None | None | None | N |
I/C | 0.8691 | likely_pathogenic | 0.8234 | pathogenic | -0.966 | Destabilizing | 1.0 | D | 0.521 | neutral | None | None | None | None | N |
I/D | 0.9182 | likely_pathogenic | 0.8552 | pathogenic | -0.41 | Destabilizing | 1.0 | D | 0.631 | neutral | None | None | None | None | N |
I/E | 0.8744 | likely_pathogenic | 0.785 | pathogenic | -0.427 | Destabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | N |
I/F | 0.286 | likely_benign | 0.237 | benign | -0.704 | Destabilizing | 0.998 | D | 0.443 | neutral | None | None | None | None | N |
I/G | 0.8452 | likely_pathogenic | 0.7566 | pathogenic | -1.058 | Destabilizing | 1.0 | D | 0.637 | neutral | None | None | None | None | N |
I/H | 0.8554 | likely_pathogenic | 0.7861 | pathogenic | -0.17 | Destabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | N |
I/K | 0.7402 | likely_pathogenic | 0.6309 | pathogenic | -0.532 | Destabilizing | 0.999 | D | 0.635 | neutral | N | 0.510334613 | None | None | N |
I/L | 0.1323 | likely_benign | 0.1184 | benign | -0.45 | Destabilizing | 0.104 | N | 0.209 | neutral | N | 0.362029742 | None | None | N |
I/M | 0.1214 | likely_benign | 0.1064 | benign | -0.841 | Destabilizing | 0.997 | D | 0.451 | neutral | N | 0.447515286 | None | None | N |
I/N | 0.7057 | likely_pathogenic | 0.5889 | pathogenic | -0.547 | Destabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | N |
I/P | 0.7583 | likely_pathogenic | 0.6489 | pathogenic | -0.564 | Destabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | N |
I/Q | 0.8176 | likely_pathogenic | 0.7226 | pathogenic | -0.629 | Destabilizing | 1.0 | D | 0.64 | neutral | None | None | None | None | N |
I/R | 0.6477 | likely_pathogenic | 0.5299 | ambiguous | -0.111 | Destabilizing | 0.999 | D | 0.645 | neutral | N | 0.510334613 | None | None | N |
I/S | 0.5423 | ambiguous | 0.4271 | ambiguous | -0.991 | Destabilizing | 1.0 | D | 0.529 | neutral | None | None | None | None | N |
I/T | 0.1972 | likely_benign | 0.1451 | benign | -0.89 | Destabilizing | 0.998 | D | 0.457 | neutral | N | 0.509294463 | None | None | N |
I/V | 0.1053 | likely_benign | 0.0902 | benign | -0.564 | Destabilizing | 0.889 | D | 0.279 | neutral | N | 0.459519004 | None | None | N |
I/W | 0.8506 | likely_pathogenic | 0.8179 | pathogenic | -0.711 | Destabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | N |
I/Y | 0.7476 | likely_pathogenic | 0.6817 | pathogenic | -0.498 | Destabilizing | 1.0 | D | 0.49 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.