Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30933 | 93022;93023;93024 | chr2:178548829;178548828;178548827 | chr2:179413556;179413555;179413554 |
N2AB | 29292 | 88099;88100;88101 | chr2:178548829;178548828;178548827 | chr2:179413556;179413555;179413554 |
N2A | 28365 | 85318;85319;85320 | chr2:178548829;178548828;178548827 | chr2:179413556;179413555;179413554 |
N2B | 21868 | 65827;65828;65829 | chr2:178548829;178548828;178548827 | chr2:179413556;179413555;179413554 |
Novex-1 | 21993 | 66202;66203;66204 | chr2:178548829;178548828;178548827 | chr2:179413556;179413555;179413554 |
Novex-2 | 22060 | 66403;66404;66405 | chr2:178548829;178548828;178548827 | chr2:179413556;179413555;179413554 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | rs1553532340 | None | 0.999 | N | 0.603 | 0.508 | 0.368369118721 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
Q/P | None | None | 0.999 | D | 0.573 | 0.636 | 0.517158968016 | gnomAD-4.0.0 | 1.36915E-06 | None | None | None | None | I | None | 2.98775E-05 | 2.23634E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Q/R | None | None | 0.997 | N | 0.563 | 0.481 | 0.219573609325 | gnomAD-4.0.0 | 1.36915E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79889E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.3346 | likely_benign | 0.3203 | benign | -0.66 | Destabilizing | 0.997 | D | 0.545 | neutral | None | None | None | None | I |
Q/C | 0.9163 | likely_pathogenic | 0.8989 | pathogenic | -0.181 | Destabilizing | 1.0 | D | 0.65 | neutral | None | None | None | None | I |
Q/D | 0.6336 | likely_pathogenic | 0.6072 | pathogenic | -0.08 | Destabilizing | 0.997 | D | 0.569 | neutral | None | None | None | None | I |
Q/E | 0.1763 | likely_benign | 0.1575 | benign | 0.033 | Stabilizing | 0.992 | D | 0.497 | neutral | N | 0.480859855 | None | None | I |
Q/F | 0.9211 | likely_pathogenic | 0.9099 | pathogenic | -0.5 | Destabilizing | 0.999 | D | 0.624 | neutral | None | None | None | None | I |
Q/G | 0.4415 | ambiguous | 0.4194 | ambiguous | -0.977 | Destabilizing | 0.997 | D | 0.471 | neutral | None | None | None | None | I |
Q/H | 0.5054 | ambiguous | 0.4801 | ambiguous | -0.482 | Destabilizing | 0.999 | D | 0.603 | neutral | N | 0.498583252 | None | None | I |
Q/I | 0.6771 | likely_pathogenic | 0.6619 | pathogenic | 0.143 | Stabilizing | 0.999 | D | 0.634 | neutral | None | None | None | None | I |
Q/K | 0.22 | likely_benign | 0.1868 | benign | -0.034 | Destabilizing | 0.997 | D | 0.537 | neutral | N | 0.426177221 | None | None | I |
Q/L | 0.2566 | likely_benign | 0.2545 | benign | 0.143 | Stabilizing | 0.997 | D | 0.471 | neutral | N | 0.487480436 | None | None | I |
Q/M | 0.4741 | ambiguous | 0.4637 | ambiguous | 0.229 | Stabilizing | 0.999 | D | 0.601 | neutral | None | None | None | None | I |
Q/N | 0.3863 | ambiguous | 0.3869 | ambiguous | -0.689 | Destabilizing | 0.999 | D | 0.553 | neutral | None | None | None | None | I |
Q/P | 0.22 | likely_benign | 0.1903 | benign | -0.095 | Destabilizing | 0.999 | D | 0.573 | neutral | D | 0.53180875 | None | None | I |
Q/R | 0.2989 | likely_benign | 0.2553 | benign | 0.063 | Stabilizing | 0.997 | D | 0.563 | neutral | N | 0.42394778 | None | None | I |
Q/S | 0.3749 | ambiguous | 0.3725 | ambiguous | -0.84 | Destabilizing | 0.997 | D | 0.545 | neutral | None | None | None | None | I |
Q/T | 0.3306 | likely_benign | 0.3147 | benign | -0.521 | Destabilizing | 0.999 | D | 0.536 | neutral | None | None | None | None | I |
Q/V | 0.4594 | ambiguous | 0.4434 | ambiguous | -0.095 | Destabilizing | 0.999 | D | 0.485 | neutral | None | None | None | None | I |
Q/W | 0.9105 | likely_pathogenic | 0.8931 | pathogenic | -0.379 | Destabilizing | 1.0 | D | 0.609 | neutral | None | None | None | None | I |
Q/Y | 0.7831 | likely_pathogenic | 0.7564 | pathogenic | -0.127 | Destabilizing | 0.999 | D | 0.569 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.