Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30935 | 93028;93029;93030 | chr2:178548823;178548822;178548821 | chr2:179413550;179413549;179413548 |
N2AB | 29294 | 88105;88106;88107 | chr2:178548823;178548822;178548821 | chr2:179413550;179413549;179413548 |
N2A | 28367 | 85324;85325;85326 | chr2:178548823;178548822;178548821 | chr2:179413550;179413549;179413548 |
N2B | 21870 | 65833;65834;65835 | chr2:178548823;178548822;178548821 | chr2:179413550;179413549;179413548 |
Novex-1 | 21995 | 66208;66209;66210 | chr2:178548823;178548822;178548821 | chr2:179413550;179413549;179413548 |
Novex-2 | 22062 | 66409;66410;66411 | chr2:178548823;178548822;178548821 | chr2:179413550;179413549;179413548 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/L | None | None | 1.0 | N | 0.704 | 0.498 | 0.690638299042 | gnomAD-4.0.0 | 1.59358E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85807E-06 | 0 | 0 |
H/Q | None | None | 1.0 | N | 0.584 | 0.366 | 0.218112801441 | gnomAD-4.0.0 | 3.42314E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49725E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.6301 | likely_pathogenic | 0.6614 | pathogenic | -1.347 | Destabilizing | 0.999 | D | 0.569 | neutral | None | None | None | None | I |
H/C | 0.3159 | likely_benign | 0.3238 | benign | -0.468 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | I |
H/D | 0.7696 | likely_pathogenic | 0.8042 | pathogenic | -1.199 | Destabilizing | 1.0 | D | 0.645 | neutral | N | 0.499445616 | None | None | I |
H/E | 0.7212 | likely_pathogenic | 0.7363 | pathogenic | -1.025 | Destabilizing | 0.999 | D | 0.439 | neutral | None | None | None | None | I |
H/F | 0.4666 | ambiguous | 0.4704 | ambiguous | 0.467 | Stabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | I |
H/G | 0.8406 | likely_pathogenic | 0.8634 | pathogenic | -1.783 | Destabilizing | 0.999 | D | 0.602 | neutral | None | None | None | None | I |
H/I | 0.4035 | ambiguous | 0.4138 | ambiguous | -0.08 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
H/K | 0.6783 | likely_pathogenic | 0.6917 | pathogenic | -0.784 | Destabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | I |
H/L | 0.175 | likely_benign | 0.1809 | benign | -0.08 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | N | 0.361376381 | None | None | I |
H/M | 0.5809 | likely_pathogenic | 0.576 | pathogenic | -0.305 | Destabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | I |
H/N | 0.3261 | likely_benign | 0.375 | ambiguous | -1.309 | Destabilizing | 0.999 | D | 0.439 | neutral | N | 0.517858018 | None | None | I |
H/P | 0.8448 | likely_pathogenic | 0.8735 | pathogenic | -0.488 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | N | 0.517858018 | None | None | I |
H/Q | 0.4552 | ambiguous | 0.4842 | ambiguous | -0.956 | Destabilizing | 1.0 | D | 0.584 | neutral | N | 0.424774499 | None | None | I |
H/R | 0.3861 | ambiguous | 0.4045 | ambiguous | -1.235 | Destabilizing | 1.0 | D | 0.583 | neutral | N | 0.474413885 | None | None | I |
H/S | 0.6029 | likely_pathogenic | 0.6366 | pathogenic | -1.377 | Destabilizing | 1.0 | D | 0.628 | neutral | None | None | None | None | I |
H/T | 0.5863 | likely_pathogenic | 0.6198 | pathogenic | -1.076 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
H/V | 0.3326 | likely_benign | 0.3356 | benign | -0.488 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | I |
H/W | 0.636 | likely_pathogenic | 0.6239 | pathogenic | 1.026 | Stabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | I |
H/Y | 0.1585 | likely_benign | 0.1694 | benign | 0.876 | Stabilizing | 0.999 | D | 0.463 | neutral | N | 0.433375339 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.