Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30942 | 93049;93050;93051 | chr2:178548802;178548801;178548800 | chr2:179413529;179413528;179413527 |
N2AB | 29301 | 88126;88127;88128 | chr2:178548802;178548801;178548800 | chr2:179413529;179413528;179413527 |
N2A | 28374 | 85345;85346;85347 | chr2:178548802;178548801;178548800 | chr2:179413529;179413528;179413527 |
N2B | 21877 | 65854;65855;65856 | chr2:178548802;178548801;178548800 | chr2:179413529;179413528;179413527 |
Novex-1 | 22002 | 66229;66230;66231 | chr2:178548802;178548801;178548800 | chr2:179413529;179413528;179413527 |
Novex-2 | 22069 | 66430;66431;66432 | chr2:178548802;178548801;178548800 | chr2:179413529;179413528;179413527 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | rs1575477437 | None | 0.968 | N | 0.406 | 0.24 | 0.272639205421 | gnomAD-4.0.0 | 6.84699E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99463E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0998 | likely_benign | 0.103 | benign | -0.454 | Destabilizing | 0.702 | D | 0.388 | neutral | None | None | None | None | I |
S/C | 0.1791 | likely_benign | 0.195 | benign | -0.3 | Destabilizing | 0.999 | D | 0.477 | neutral | N | 0.495449477 | None | None | I |
S/D | 0.5736 | likely_pathogenic | 0.6345 | pathogenic | -0.257 | Destabilizing | 0.919 | D | 0.358 | neutral | None | None | None | None | I |
S/E | 0.7506 | likely_pathogenic | 0.8016 | pathogenic | -0.323 | Destabilizing | 0.919 | D | 0.353 | neutral | None | None | None | None | I |
S/F | 0.4495 | ambiguous | 0.4544 | ambiguous | -0.885 | Destabilizing | 0.988 | D | 0.532 | neutral | None | None | None | None | I |
S/G | 0.132 | likely_benign | 0.1418 | benign | -0.625 | Destabilizing | 0.896 | D | 0.382 | neutral | N | 0.494435519 | None | None | I |
S/H | 0.5688 | likely_pathogenic | 0.6254 | pathogenic | -1.157 | Destabilizing | 0.999 | D | 0.468 | neutral | None | None | None | None | I |
S/I | 0.3414 | ambiguous | 0.3741 | ambiguous | -0.126 | Destabilizing | 0.968 | D | 0.443 | neutral | N | 0.483421609 | None | None | I |
S/K | 0.8637 | likely_pathogenic | 0.9 | pathogenic | -0.648 | Destabilizing | 0.919 | D | 0.361 | neutral | None | None | None | None | I |
S/L | 0.2036 | likely_benign | 0.2077 | benign | -0.126 | Destabilizing | 0.851 | D | 0.423 | neutral | None | None | None | None | I |
S/M | 0.3246 | likely_benign | 0.328 | benign | 0.232 | Stabilizing | 0.999 | D | 0.465 | neutral | None | None | None | None | I |
S/N | 0.2092 | likely_benign | 0.2512 | benign | -0.439 | Destabilizing | 0.896 | D | 0.396 | neutral | N | 0.456199093 | None | None | I |
S/P | 0.2491 | likely_benign | 0.2513 | benign | -0.204 | Destabilizing | 0.988 | D | 0.397 | neutral | None | None | None | None | I |
S/Q | 0.6993 | likely_pathogenic | 0.7515 | pathogenic | -0.705 | Destabilizing | 0.988 | D | 0.424 | neutral | None | None | None | None | I |
S/R | 0.8247 | likely_pathogenic | 0.8723 | pathogenic | -0.398 | Destabilizing | 0.968 | D | 0.406 | neutral | N | 0.51127511 | None | None | I |
S/T | 0.0929 | likely_benign | 0.0905 | benign | -0.487 | Destabilizing | 0.016 | N | 0.192 | neutral | N | 0.442759174 | None | None | I |
S/V | 0.2782 | likely_benign | 0.2979 | benign | -0.204 | Destabilizing | 0.851 | D | 0.416 | neutral | None | None | None | None | I |
S/W | 0.6283 | likely_pathogenic | 0.6326 | pathogenic | -0.874 | Destabilizing | 0.999 | D | 0.634 | neutral | None | None | None | None | I |
S/Y | 0.431 | ambiguous | 0.4413 | ambiguous | -0.611 | Destabilizing | 0.996 | D | 0.541 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.