Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30943 | 93052;93053;93054 | chr2:178548799;178548798;178548797 | chr2:179413526;179413525;179413524 |
N2AB | 29302 | 88129;88130;88131 | chr2:178548799;178548798;178548797 | chr2:179413526;179413525;179413524 |
N2A | 28375 | 85348;85349;85350 | chr2:178548799;178548798;178548797 | chr2:179413526;179413525;179413524 |
N2B | 21878 | 65857;65858;65859 | chr2:178548799;178548798;178548797 | chr2:179413526;179413525;179413524 |
Novex-1 | 22003 | 66232;66233;66234 | chr2:178548799;178548798;178548797 | chr2:179413526;179413525;179413524 |
Novex-2 | 22070 | 66433;66434;66435 | chr2:178548799;178548798;178548797 | chr2:179413526;179413525;179413524 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.961 | N | 0.64 | 0.415 | 0.547470054201 | gnomAD-4.0.0 | 1.59378E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8828 | likely_pathogenic | 0.8836 | pathogenic | -2.422 | Highly Destabilizing | 0.931 | D | 0.577 | neutral | None | None | None | None | I |
I/C | 0.9261 | likely_pathogenic | 0.9266 | pathogenic | -1.593 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
I/D | 0.9986 | likely_pathogenic | 0.9981 | pathogenic | -2.457 | Highly Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | I |
I/E | 0.9959 | likely_pathogenic | 0.995 | pathogenic | -2.306 | Highly Destabilizing | 0.999 | D | 0.772 | deleterious | None | None | None | None | I |
I/F | 0.4895 | ambiguous | 0.4887 | ambiguous | -1.52 | Destabilizing | 0.994 | D | 0.632 | neutral | N | 0.497652452 | None | None | I |
I/G | 0.9886 | likely_pathogenic | 0.9869 | pathogenic | -2.908 | Highly Destabilizing | 0.999 | D | 0.767 | deleterious | None | None | None | None | I |
I/H | 0.9915 | likely_pathogenic | 0.9898 | pathogenic | -2.227 | Highly Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | I |
I/K | 0.9918 | likely_pathogenic | 0.9897 | pathogenic | -1.928 | Destabilizing | 0.999 | D | 0.772 | deleterious | None | None | None | None | I |
I/L | 0.1646 | likely_benign | 0.1657 | benign | -1.056 | Destabilizing | 0.689 | D | 0.396 | neutral | N | 0.424768059 | None | None | I |
I/M | 0.2177 | likely_benign | 0.2369 | benign | -0.829 | Destabilizing | 0.994 | D | 0.625 | neutral | N | 0.457213051 | None | None | I |
I/N | 0.9786 | likely_pathogenic | 0.9765 | pathogenic | -2.011 | Highly Destabilizing | 0.998 | D | 0.798 | deleterious | N | 0.491953531 | None | None | I |
I/P | 0.9935 | likely_pathogenic | 0.9908 | pathogenic | -1.488 | Destabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | I |
I/Q | 0.9881 | likely_pathogenic | 0.9863 | pathogenic | -2.001 | Highly Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | I |
I/R | 0.9871 | likely_pathogenic | 0.984 | pathogenic | -1.47 | Destabilizing | 0.999 | D | 0.8 | deleterious | None | None | None | None | I |
I/S | 0.952 | likely_pathogenic | 0.9479 | pathogenic | -2.678 | Highly Destabilizing | 0.994 | D | 0.746 | deleterious | N | 0.491700041 | None | None | I |
I/T | 0.9309 | likely_pathogenic | 0.934 | pathogenic | -2.387 | Highly Destabilizing | 0.961 | D | 0.64 | neutral | N | 0.479836757 | None | None | I |
I/V | 0.1243 | likely_benign | 0.1345 | benign | -1.488 | Destabilizing | 0.044 | N | 0.222 | neutral | N | 0.426285425 | None | None | I |
I/W | 0.9891 | likely_pathogenic | 0.9858 | pathogenic | -1.801 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | I |
I/Y | 0.9584 | likely_pathogenic | 0.9486 | pathogenic | -1.555 | Destabilizing | 0.999 | D | 0.768 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.