Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30945 | 93058;93059;93060 | chr2:178548793;178548792;178548791 | chr2:179413520;179413519;179413518 |
N2AB | 29304 | 88135;88136;88137 | chr2:178548793;178548792;178548791 | chr2:179413520;179413519;179413518 |
N2A | 28377 | 85354;85355;85356 | chr2:178548793;178548792;178548791 | chr2:179413520;179413519;179413518 |
N2B | 21880 | 65863;65864;65865 | chr2:178548793;178548792;178548791 | chr2:179413520;179413519;179413518 |
Novex-1 | 22005 | 66238;66239;66240 | chr2:178548793;178548792;178548791 | chr2:179413520;179413519;179413518 |
Novex-2 | 22072 | 66439;66440;66441 | chr2:178548793;178548792;178548791 | chr2:179413520;179413519;179413518 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 1.0 | N | 0.771 | 0.417 | 0.732157991247 | gnomAD-4.0.0 | 4.78217E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71667E-06 | 1.43275E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9586 | likely_pathogenic | 0.9565 | pathogenic | -1.916 | Destabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | N |
L/C | 0.9214 | likely_pathogenic | 0.9184 | pathogenic | -1.375 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
L/D | 0.999 | likely_pathogenic | 0.999 | pathogenic | -2.798 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
L/E | 0.9962 | likely_pathogenic | 0.996 | pathogenic | -2.536 | Highly Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
L/F | 0.57 | likely_pathogenic | 0.5925 | pathogenic | -1.331 | Destabilizing | 1.0 | D | 0.771 | deleterious | N | 0.486209747 | None | None | N |
L/G | 0.9906 | likely_pathogenic | 0.9896 | pathogenic | -2.386 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
L/H | 0.9802 | likely_pathogenic | 0.981 | pathogenic | -2.243 | Highly Destabilizing | 1.0 | D | 0.82 | deleterious | D | 0.602682931 | None | None | N |
L/I | 0.1873 | likely_benign | 0.1996 | benign | -0.511 | Destabilizing | 0.999 | D | 0.587 | neutral | N | 0.504156616 | None | None | N |
L/K | 0.9905 | likely_pathogenic | 0.9903 | pathogenic | -1.516 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
L/M | 0.2647 | likely_benign | 0.2851 | benign | -0.734 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
L/N | 0.9928 | likely_pathogenic | 0.9923 | pathogenic | -2.135 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
L/P | 0.9946 | likely_pathogenic | 0.9937 | pathogenic | -0.971 | Destabilizing | 1.0 | D | 0.843 | deleterious | D | 0.602682931 | None | None | N |
L/Q | 0.98 | likely_pathogenic | 0.979 | pathogenic | -1.828 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
L/R | 0.9834 | likely_pathogenic | 0.9821 | pathogenic | -1.736 | Destabilizing | 1.0 | D | 0.831 | deleterious | D | 0.602682931 | None | None | N |
L/S | 0.9923 | likely_pathogenic | 0.9919 | pathogenic | -2.547 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
L/T | 0.9765 | likely_pathogenic | 0.9736 | pathogenic | -2.14 | Highly Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
L/V | 0.3255 | likely_benign | 0.3343 | benign | -0.971 | Destabilizing | 0.999 | D | 0.601 | neutral | D | 0.544097076 | None | None | N |
L/W | 0.9519 | likely_pathogenic | 0.9547 | pathogenic | -1.673 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
L/Y | 0.9426 | likely_pathogenic | 0.946 | pathogenic | -1.392 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.