Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3095 | 9508;9509;9510 | chr2:178768036;178768035;178768034 | chr2:179632763;179632762;179632761 |
N2AB | 3095 | 9508;9509;9510 | chr2:178768036;178768035;178768034 | chr2:179632763;179632762;179632761 |
N2A | 3095 | 9508;9509;9510 | chr2:178768036;178768035;178768034 | chr2:179632763;179632762;179632761 |
N2B | 3049 | 9370;9371;9372 | chr2:178768036;178768035;178768034 | chr2:179632763;179632762;179632761 |
Novex-1 | 3049 | 9370;9371;9372 | chr2:178768036;178768035;178768034 | chr2:179632763;179632762;179632761 |
Novex-2 | 3049 | 9370;9371;9372 | chr2:178768036;178768035;178768034 | chr2:179632763;179632762;179632761 |
Novex-3 | 3095 | 9508;9509;9510 | chr2:178768036;178768035;178768034 | chr2:179632763;179632762;179632761 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | None | None | 0.722 | N | 0.483 | 0.395 | 0.301789629655 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.3736 | ambiguous | 0.3308 | benign | -0.151 | Destabilizing | 0.775 | D | 0.475 | neutral | None | None | None | None | N |
Q/C | 0.7983 | likely_pathogenic | 0.767 | pathogenic | 0.263 | Stabilizing | 0.996 | D | 0.579 | neutral | None | None | None | None | N |
Q/D | 0.654 | likely_pathogenic | 0.5928 | pathogenic | -0.088 | Destabilizing | 0.775 | D | 0.446 | neutral | None | None | None | None | N |
Q/E | 0.1121 | likely_benign | 0.1044 | benign | -0.126 | Destabilizing | 0.517 | D | 0.454 | neutral | N | 0.497755123 | None | None | N |
Q/F | 0.8431 | likely_pathogenic | 0.8117 | pathogenic | -0.38 | Destabilizing | 0.923 | D | 0.557 | neutral | None | None | None | None | N |
Q/G | 0.5367 | ambiguous | 0.4684 | ambiguous | -0.33 | Destabilizing | 0.775 | D | 0.454 | neutral | None | None | None | None | N |
Q/H | 0.3543 | ambiguous | 0.3198 | benign | -0.261 | Destabilizing | 0.018 | N | 0.231 | neutral | D | 0.546256747 | None | None | N |
Q/I | 0.4219 | ambiguous | 0.3939 | ambiguous | 0.23 | Stabilizing | 0.961 | D | 0.549 | neutral | None | None | None | None | N |
Q/K | 0.1136 | likely_benign | 0.1002 | benign | 0.032 | Stabilizing | 0.722 | D | 0.497 | neutral | N | 0.506996888 | None | None | N |
Q/L | 0.2475 | likely_benign | 0.2216 | benign | 0.23 | Stabilizing | 0.722 | D | 0.429 | neutral | N | 0.512078711 | None | None | N |
Q/M | 0.4046 | ambiguous | 0.3887 | ambiguous | 0.465 | Stabilizing | 0.987 | D | 0.42 | neutral | None | None | None | None | N |
Q/N | 0.4484 | ambiguous | 0.4118 | ambiguous | -0.157 | Destabilizing | 0.633 | D | 0.429 | neutral | None | None | None | None | N |
Q/P | 0.9446 | likely_pathogenic | 0.9022 | pathogenic | 0.131 | Stabilizing | 0.983 | D | 0.439 | neutral | D | 0.695423188 | None | None | N |
Q/R | 0.1423 | likely_benign | 0.1242 | benign | 0.203 | Stabilizing | 0.722 | D | 0.483 | neutral | N | 0.515685191 | None | None | N |
Q/S | 0.4464 | ambiguous | 0.4031 | ambiguous | -0.156 | Destabilizing | 0.775 | D | 0.449 | neutral | None | None | None | None | N |
Q/T | 0.2954 | likely_benign | 0.2668 | benign | -0.053 | Destabilizing | 0.875 | D | 0.419 | neutral | None | None | None | None | N |
Q/V | 0.3011 | likely_benign | 0.2792 | benign | 0.131 | Stabilizing | 0.961 | D | 0.412 | neutral | None | None | None | None | N |
Q/W | 0.8303 | likely_pathogenic | 0.7799 | pathogenic | -0.393 | Destabilizing | 0.996 | D | 0.545 | neutral | None | None | None | None | N |
Q/Y | 0.703 | likely_pathogenic | 0.6627 | pathogenic | -0.135 | Destabilizing | 0.858 | D | 0.439 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.