Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3096 | 9511;9512;9513 | chr2:178768033;178768032;178768031 | chr2:179632760;179632759;179632758 |
N2AB | 3096 | 9511;9512;9513 | chr2:178768033;178768032;178768031 | chr2:179632760;179632759;179632758 |
N2A | 3096 | 9511;9512;9513 | chr2:178768033;178768032;178768031 | chr2:179632760;179632759;179632758 |
N2B | 3050 | 9373;9374;9375 | chr2:178768033;178768032;178768031 | chr2:179632760;179632759;179632758 |
Novex-1 | 3050 | 9373;9374;9375 | chr2:178768033;178768032;178768031 | chr2:179632760;179632759;179632758 |
Novex-2 | 3050 | 9373;9374;9375 | chr2:178768033;178768032;178768031 | chr2:179632760;179632759;179632758 |
Novex-3 | 3096 | 9511;9512;9513 | chr2:178768033;178768032;178768031 | chr2:179632760;179632759;179632758 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.822 | N | 0.548 | 0.508 | 0.489938136499 | gnomAD-4.0.0 | 1.36815E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79859E-06 | 0 | 0 |
E/D | None | None | 0.822 | N | 0.516 | 0.131 | 0.262662153117 | gnomAD-4.0.0 | 1.59054E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.0217E-05 |
E/V | rs772499668 | 0.095 | 0.942 | D | 0.55 | 0.497 | 0.621312436561 | gnomAD-2.1.1 | 7.96E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.53E-05 | None | 0 | 0 | 0 |
E/V | rs772499668 | 0.095 | 0.942 | D | 0.55 | 0.497 | 0.621312436561 | gnomAD-4.0.0 | 4.78853E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.95588E-05 | 1.65579E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3295 | likely_benign | 0.2545 | benign | -0.437 | Destabilizing | 0.822 | D | 0.548 | neutral | N | 0.511545165 | None | None | N |
E/C | 0.9608 | likely_pathogenic | 0.9423 | pathogenic | -0.23 | Destabilizing | 0.998 | D | 0.692 | prob.neutral | None | None | None | None | N |
E/D | 0.3797 | ambiguous | 0.2884 | benign | -0.471 | Destabilizing | 0.822 | D | 0.516 | neutral | N | 0.503957792 | None | None | N |
E/F | 0.8977 | likely_pathogenic | 0.8701 | pathogenic | -0.204 | Destabilizing | 0.915 | D | 0.689 | prob.neutral | None | None | None | None | N |
E/G | 0.5114 | ambiguous | 0.4165 | ambiguous | -0.671 | Destabilizing | 0.971 | D | 0.549 | neutral | D | 0.692499475 | None | None | N |
E/H | 0.8309 | likely_pathogenic | 0.7637 | pathogenic | -0.064 | Destabilizing | 0.956 | D | 0.549 | neutral | None | None | None | None | N |
E/I | 0.4901 | ambiguous | 0.4025 | ambiguous | 0.157 | Stabilizing | 0.956 | D | 0.685 | prob.neutral | None | None | None | None | N |
E/K | 0.4604 | ambiguous | 0.3702 | ambiguous | -0.004 | Destabilizing | 0.698 | D | 0.545 | neutral | N | 0.510101189 | None | None | N |
E/L | 0.5662 | likely_pathogenic | 0.4945 | ambiguous | 0.157 | Stabilizing | 0.915 | D | 0.593 | neutral | None | None | None | None | N |
E/M | 0.6237 | likely_pathogenic | 0.5551 | ambiguous | 0.207 | Stabilizing | 0.998 | D | 0.637 | neutral | None | None | None | None | N |
E/N | 0.6316 | likely_pathogenic | 0.5126 | ambiguous | -0.293 | Destabilizing | 0.978 | D | 0.535 | neutral | None | None | None | None | N |
E/P | 0.5144 | ambiguous | 0.4286 | ambiguous | -0.02 | Destabilizing | 0.993 | D | 0.613 | neutral | None | None | None | None | N |
E/Q | 0.327 | likely_benign | 0.2679 | benign | -0.236 | Destabilizing | 0.294 | N | 0.301 | neutral | D | 0.550364197 | None | None | N |
E/R | 0.6606 | likely_pathogenic | 0.5722 | pathogenic | 0.276 | Stabilizing | 0.956 | D | 0.533 | neutral | None | None | None | None | N |
E/S | 0.5575 | ambiguous | 0.4374 | ambiguous | -0.488 | Destabilizing | 0.86 | D | 0.533 | neutral | None | None | None | None | N |
E/T | 0.5144 | ambiguous | 0.4147 | ambiguous | -0.304 | Destabilizing | 0.978 | D | 0.552 | neutral | None | None | None | None | N |
E/V | 0.3245 | likely_benign | 0.2596 | benign | -0.02 | Destabilizing | 0.942 | D | 0.55 | neutral | D | 0.541029134 | None | None | N |
E/W | 0.9794 | likely_pathogenic | 0.9725 | pathogenic | -0.04 | Destabilizing | 0.994 | D | 0.677 | prob.neutral | None | None | None | None | N |
E/Y | 0.8596 | likely_pathogenic | 0.8241 | pathogenic | 0.027 | Stabilizing | 0.043 | N | 0.333 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.