Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30961 | 93106;93107;93108 | chr2:178548745;178548744;178548743 | chr2:179413472;179413471;179413470 |
N2AB | 29320 | 88183;88184;88185 | chr2:178548745;178548744;178548743 | chr2:179413472;179413471;179413470 |
N2A | 28393 | 85402;85403;85404 | chr2:178548745;178548744;178548743 | chr2:179413472;179413471;179413470 |
N2B | 21896 | 65911;65912;65913 | chr2:178548745;178548744;178548743 | chr2:179413472;179413471;179413470 |
Novex-1 | 22021 | 66286;66287;66288 | chr2:178548745;178548744;178548743 | chr2:179413472;179413471;179413470 |
Novex-2 | 22088 | 66487;66488;66489 | chr2:178548745;178548744;178548743 | chr2:179413472;179413471;179413470 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | None | None | 0.967 | N | 0.583 | 0.387 | 0.28297238246 | gnomAD-4.0.0 | 4.78976E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.29623E-06 | 0 | 0 |
K/R | rs756055571 | -0.48 | 0.025 | N | 0.261 | 0.16 | 0.264547087235 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
K/R | rs756055571 | -0.48 | 0.025 | N | 0.261 | 0.16 | 0.264547087235 | gnomAD-4.0.0 | 1.59149E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85819E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9772 | likely_pathogenic | 0.9798 | pathogenic | -1.03 | Destabilizing | 0.916 | D | 0.502 | neutral | None | None | None | None | N |
K/C | 0.9465 | likely_pathogenic | 0.9521 | pathogenic | -1.033 | Destabilizing | 0.999 | D | 0.772 | deleterious | None | None | None | None | N |
K/D | 0.996 | likely_pathogenic | 0.9958 | pathogenic | -0.076 | Destabilizing | 0.987 | D | 0.698 | prob.neutral | None | None | None | None | N |
K/E | 0.9722 | likely_pathogenic | 0.9693 | pathogenic | 0.042 | Stabilizing | 0.892 | D | 0.444 | neutral | D | 0.526981315 | None | None | N |
K/F | 0.9835 | likely_pathogenic | 0.9858 | pathogenic | -0.981 | Destabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | N |
K/G | 0.9847 | likely_pathogenic | 0.9852 | pathogenic | -1.364 | Destabilizing | 0.975 | D | 0.658 | neutral | None | None | None | None | N |
K/H | 0.7742 | likely_pathogenic | 0.7763 | pathogenic | -1.795 | Destabilizing | 0.997 | D | 0.704 | prob.neutral | None | None | None | None | N |
K/I | 0.9216 | likely_pathogenic | 0.9315 | pathogenic | -0.161 | Destabilizing | 0.983 | D | 0.772 | deleterious | N | 0.503001257 | None | None | N |
K/L | 0.8696 | likely_pathogenic | 0.8747 | pathogenic | -0.161 | Destabilizing | 0.975 | D | 0.658 | neutral | None | None | None | None | N |
K/M | 0.8353 | likely_pathogenic | 0.8471 | pathogenic | -0.146 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | N |
K/N | 0.9822 | likely_pathogenic | 0.9818 | pathogenic | -0.492 | Destabilizing | 0.967 | D | 0.596 | neutral | D | 0.526727825 | None | None | N |
K/P | 0.9963 | likely_pathogenic | 0.9964 | pathogenic | -0.424 | Destabilizing | 0.996 | D | 0.701 | prob.neutral | None | None | None | None | N |
K/Q | 0.7455 | likely_pathogenic | 0.7514 | pathogenic | -0.624 | Destabilizing | 0.967 | D | 0.583 | neutral | N | 0.499887385 | None | None | N |
K/R | 0.1544 | likely_benign | 0.1635 | benign | -0.569 | Destabilizing | 0.025 | N | 0.261 | neutral | N | 0.457305638 | None | None | N |
K/S | 0.9849 | likely_pathogenic | 0.9856 | pathogenic | -1.308 | Destabilizing | 0.916 | D | 0.515 | neutral | None | None | None | None | N |
K/T | 0.9594 | likely_pathogenic | 0.9593 | pathogenic | -0.977 | Destabilizing | 0.967 | D | 0.651 | neutral | D | 0.526474336 | None | None | N |
K/V | 0.9073 | likely_pathogenic | 0.9145 | pathogenic | -0.424 | Destabilizing | 0.987 | D | 0.719 | prob.delet. | None | None | None | None | N |
K/W | 0.9852 | likely_pathogenic | 0.9868 | pathogenic | -0.771 | Destabilizing | 0.999 | D | 0.752 | deleterious | None | None | None | None | N |
K/Y | 0.9576 | likely_pathogenic | 0.9613 | pathogenic | -0.441 | Destabilizing | 0.996 | D | 0.745 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.