Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30966 | 93121;93122;93123 | chr2:178548730;178548729;178548728 | chr2:179413457;179413456;179413455 |
N2AB | 29325 | 88198;88199;88200 | chr2:178548730;178548729;178548728 | chr2:179413457;179413456;179413455 |
N2A | 28398 | 85417;85418;85419 | chr2:178548730;178548729;178548728 | chr2:179413457;179413456;179413455 |
N2B | 21901 | 65926;65927;65928 | chr2:178548730;178548729;178548728 | chr2:179413457;179413456;179413455 |
Novex-1 | 22026 | 66301;66302;66303 | chr2:178548730;178548729;178548728 | chr2:179413457;179413456;179413455 |
Novex-2 | 22093 | 66502;66503;66504 | chr2:178548730;178548729;178548728 | chr2:179413457;179413456;179413455 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.999 | N | 0.503 | 0.355 | 0.655567208272 | gnomAD-4.0.0 | 3.18272E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71634E-06 | 0 | 0 |
L/P | None | None | 1.0 | D | 0.831 | 0.805 | 0.865153388441 | gnomAD-4.0.0 | 1.59129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88395E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7887 | likely_pathogenic | 0.7893 | pathogenic | -1.987 | Destabilizing | 0.999 | D | 0.67 | neutral | None | None | None | None | N |
L/C | 0.879 | likely_pathogenic | 0.877 | pathogenic | -1.578 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
L/D | 0.9714 | likely_pathogenic | 0.972 | pathogenic | -0.931 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
L/E | 0.9243 | likely_pathogenic | 0.925 | pathogenic | -0.804 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
L/F | 0.3867 | ambiguous | 0.3904 | ambiguous | -1.232 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | N | 0.501441451 | None | None | N |
L/G | 0.9384 | likely_pathogenic | 0.935 | pathogenic | -2.437 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
L/H | 0.8587 | likely_pathogenic | 0.8478 | pathogenic | -1.672 | Destabilizing | 1.0 | D | 0.816 | deleterious | D | 0.537676415 | None | None | N |
L/I | 0.1082 | likely_benign | 0.119 | benign | -0.762 | Destabilizing | 0.999 | D | 0.503 | neutral | N | 0.516476726 | None | None | N |
L/K | 0.9105 | likely_pathogenic | 0.9028 | pathogenic | -1.308 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
L/M | 0.252 | likely_benign | 0.2581 | benign | -0.817 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
L/N | 0.9086 | likely_pathogenic | 0.9083 | pathogenic | -1.34 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
L/P | 0.6454 | likely_pathogenic | 0.6622 | pathogenic | -1.142 | Destabilizing | 1.0 | D | 0.831 | deleterious | D | 0.52606662 | None | None | N |
L/Q | 0.8273 | likely_pathogenic | 0.8113 | pathogenic | -1.291 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
L/R | 0.8591 | likely_pathogenic | 0.8475 | pathogenic | -0.999 | Destabilizing | 1.0 | D | 0.831 | deleterious | D | 0.54877923 | None | None | N |
L/S | 0.9037 | likely_pathogenic | 0.8984 | pathogenic | -2.18 | Highly Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
L/T | 0.7244 | likely_pathogenic | 0.7249 | pathogenic | -1.898 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
L/V | 0.1539 | likely_benign | 0.1643 | benign | -1.142 | Destabilizing | 0.999 | D | 0.513 | neutral | D | 0.525136281 | None | None | N |
L/W | 0.7722 | likely_pathogenic | 0.7602 | pathogenic | -1.341 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
L/Y | 0.8167 | likely_pathogenic | 0.8074 | pathogenic | -1.093 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.