Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3097 | 9514;9515;9516 | chr2:178768030;178768029;178768028 | chr2:179632757;179632756;179632755 |
N2AB | 3097 | 9514;9515;9516 | chr2:178768030;178768029;178768028 | chr2:179632757;179632756;179632755 |
N2A | 3097 | 9514;9515;9516 | chr2:178768030;178768029;178768028 | chr2:179632757;179632756;179632755 |
N2B | 3051 | 9376;9377;9378 | chr2:178768030;178768029;178768028 | chr2:179632757;179632756;179632755 |
Novex-1 | 3051 | 9376;9377;9378 | chr2:178768030;178768029;178768028 | chr2:179632757;179632756;179632755 |
Novex-2 | 3051 | 9376;9377;9378 | chr2:178768030;178768029;178768028 | chr2:179632757;179632756;179632755 |
Novex-3 | 3097 | 9514;9515;9516 | chr2:178768030;178768029;178768028 | chr2:179632757;179632756;179632755 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs373366126 | -1.515 | 1.0 | D | 0.879 | 0.837 | None | gnomAD-2.1.1 | 2.83E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 5.43E-05 | 1.38543E-04 |
L/P | rs373366126 | -1.515 | 1.0 | D | 0.879 | 0.837 | None | gnomAD-3.1.2 | 5.91E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.17571E-04 | 0 | 0 |
L/P | rs373366126 | -1.515 | 1.0 | D | 0.879 | 0.837 | None | gnomAD-4.0.0 | 1.19576E-04 | None | None | None | None | N | None | 2.66923E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.55081E-04 | 0 | 1.28033E-04 |
L/Q | None | -2.023 | 1.0 | D | 0.866 | 0.792 | 0.867437640688 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
L/Q | None | -2.023 | 1.0 | D | 0.866 | 0.792 | 0.867437640688 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/Q | None | -2.023 | 1.0 | D | 0.866 | 0.792 | 0.867437640688 | gnomAD-4.0.0 | 6.57013E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46964E-05 | 0 | 0 |
L/R | rs373366126 | -1.241 | 1.0 | D | 0.875 | 0.821 | 0.865175587277 | gnomAD-2.1.1 | 7.96E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.53E-05 | None | 0 | 0 | 0 |
L/R | rs373366126 | -1.241 | 1.0 | D | 0.875 | 0.821 | 0.865175587277 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07125E-04 | 0 |
L/R | rs373366126 | -1.241 | 1.0 | D | 0.875 | 0.821 | 0.865175587277 | gnomAD-4.0.0 | 2.47827E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 3.29359E-05 | 1.60041E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9197 | likely_pathogenic | 0.8958 | pathogenic | -2.097 | Highly Destabilizing | 0.999 | D | 0.712 | prob.delet. | None | None | None | None | N |
L/C | 0.9246 | likely_pathogenic | 0.9243 | pathogenic | -1.52 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
L/D | 0.9964 | likely_pathogenic | 0.9946 | pathogenic | -1.785 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
L/E | 0.975 | likely_pathogenic | 0.9632 | pathogenic | -1.65 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
L/F | 0.5337 | ambiguous | 0.4779 | ambiguous | -1.254 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
L/G | 0.9825 | likely_pathogenic | 0.9766 | pathogenic | -2.532 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
L/H | 0.9488 | likely_pathogenic | 0.9294 | pathogenic | -1.608 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
L/I | 0.1172 | likely_benign | 0.1062 | benign | -0.899 | Destabilizing | 0.999 | D | 0.505 | neutral | None | None | None | None | N |
L/K | 0.9562 | likely_pathogenic | 0.9431 | pathogenic | -1.666 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
L/M | 0.2371 | likely_benign | 0.2296 | benign | -0.883 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | D | 0.652668106 | None | None | N |
L/N | 0.977 | likely_pathogenic | 0.9692 | pathogenic | -1.797 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
L/P | 0.9772 | likely_pathogenic | 0.9627 | pathogenic | -1.273 | Destabilizing | 1.0 | D | 0.879 | deleterious | D | 0.736070716 | None | None | N |
L/Q | 0.9096 | likely_pathogenic | 0.8728 | pathogenic | -1.777 | Destabilizing | 1.0 | D | 0.866 | deleterious | D | 0.736484018 | None | None | N |
L/R | 0.9422 | likely_pathogenic | 0.9198 | pathogenic | -1.218 | Destabilizing | 1.0 | D | 0.875 | deleterious | D | 0.772777184 | None | None | N |
L/S | 0.9771 | likely_pathogenic | 0.9658 | pathogenic | -2.467 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
L/T | 0.9099 | likely_pathogenic | 0.8836 | pathogenic | -2.185 | Highly Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
L/V | 0.2219 | likely_benign | 0.1986 | benign | -1.273 | Destabilizing | 0.999 | D | 0.502 | neutral | N | 0.513348375 | None | None | N |
L/W | 0.8477 | likely_pathogenic | 0.8193 | pathogenic | -1.394 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
L/Y | 0.8943 | likely_pathogenic | 0.8795 | pathogenic | -1.166 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.