Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30970 | 93133;93134;93135 | chr2:178548718;178548717;178548716 | chr2:179413445;179413444;179413443 |
N2AB | 29329 | 88210;88211;88212 | chr2:178548718;178548717;178548716 | chr2:179413445;179413444;179413443 |
N2A | 28402 | 85429;85430;85431 | chr2:178548718;178548717;178548716 | chr2:179413445;179413444;179413443 |
N2B | 21905 | 65938;65939;65940 | chr2:178548718;178548717;178548716 | chr2:179413445;179413444;179413443 |
Novex-1 | 22030 | 66313;66314;66315 | chr2:178548718;178548717;178548716 | chr2:179413445;179413444;179413443 |
Novex-2 | 22097 | 66514;66515;66516 | chr2:178548718;178548717;178548716 | chr2:179413445;179413444;179413443 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs766530422 | -0.768 | 0.925 | N | 0.455 | 0.171 | 0.311079019809 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
A/T | rs766530422 | -0.768 | 0.925 | N | 0.455 | 0.171 | 0.311079019809 | gnomAD-4.0.0 | 3.18245E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86541E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5247 | ambiguous | 0.5117 | ambiguous | -1.089 | Destabilizing | 1.0 | D | 0.511 | neutral | None | None | None | None | N |
A/D | 0.9045 | likely_pathogenic | 0.9161 | pathogenic | -0.976 | Destabilizing | 0.989 | D | 0.641 | neutral | D | 0.533078187 | None | None | N |
A/E | 0.8675 | likely_pathogenic | 0.8816 | pathogenic | -1.016 | Destabilizing | 0.991 | D | 0.589 | neutral | None | None | None | None | N |
A/F | 0.7653 | likely_pathogenic | 0.781 | pathogenic | -1.034 | Destabilizing | 0.996 | D | 0.693 | prob.neutral | None | None | None | None | N |
A/G | 0.196 | likely_benign | 0.1949 | benign | -1.08 | Destabilizing | 0.071 | N | 0.322 | neutral | N | 0.498984256 | None | None | N |
A/H | 0.8993 | likely_pathogenic | 0.9166 | pathogenic | -1.275 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | N |
A/I | 0.608 | likely_pathogenic | 0.599 | pathogenic | -0.34 | Destabilizing | 0.983 | D | 0.585 | neutral | None | None | None | None | N |
A/K | 0.9404 | likely_pathogenic | 0.9494 | pathogenic | -1.155 | Destabilizing | 0.991 | D | 0.593 | neutral | None | None | None | None | N |
A/L | 0.5378 | ambiguous | 0.5176 | ambiguous | -0.34 | Destabilizing | 0.942 | D | 0.505 | neutral | None | None | None | None | N |
A/M | 0.5437 | ambiguous | 0.546 | ambiguous | -0.386 | Destabilizing | 0.999 | D | 0.596 | neutral | None | None | None | None | N |
A/N | 0.8149 | likely_pathogenic | 0.843 | pathogenic | -0.924 | Destabilizing | 0.991 | D | 0.654 | neutral | None | None | None | None | N |
A/P | 0.9172 | likely_pathogenic | 0.9213 | pathogenic | -0.464 | Destabilizing | 0.994 | D | 0.621 | neutral | N | 0.494784591 | None | None | N |
A/Q | 0.8629 | likely_pathogenic | 0.8725 | pathogenic | -1.068 | Destabilizing | 0.996 | D | 0.625 | neutral | None | None | None | None | N |
A/R | 0.9123 | likely_pathogenic | 0.9164 | pathogenic | -0.846 | Destabilizing | 0.996 | D | 0.624 | neutral | None | None | None | None | N |
A/S | 0.1683 | likely_benign | 0.1814 | benign | -1.286 | Destabilizing | 0.689 | D | 0.334 | neutral | N | 0.501139127 | None | None | N |
A/T | 0.1775 | likely_benign | 0.1961 | benign | -1.219 | Destabilizing | 0.925 | D | 0.455 | neutral | N | 0.489383338 | None | None | N |
A/V | 0.2628 | likely_benign | 0.2528 | benign | -0.464 | Destabilizing | 0.433 | N | 0.322 | neutral | N | 0.465407613 | None | None | N |
A/W | 0.9426 | likely_pathogenic | 0.942 | pathogenic | -1.345 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
A/Y | 0.8318 | likely_pathogenic | 0.8376 | pathogenic | -0.934 | Destabilizing | 0.999 | D | 0.686 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.