Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30972 | 93139;93140;93141 | chr2:178548712;178548711;178548710 | chr2:179413439;179413438;179413437 |
N2AB | 29331 | 88216;88217;88218 | chr2:178548712;178548711;178548710 | chr2:179413439;179413438;179413437 |
N2A | 28404 | 85435;85436;85437 | chr2:178548712;178548711;178548710 | chr2:179413439;179413438;179413437 |
N2B | 21907 | 65944;65945;65946 | chr2:178548712;178548711;178548710 | chr2:179413439;179413438;179413437 |
Novex-1 | 22032 | 66319;66320;66321 | chr2:178548712;178548711;178548710 | chr2:179413439;179413438;179413437 |
Novex-2 | 22099 | 66520;66521;66522 | chr2:178548712;178548711;178548710 | chr2:179413439;179413438;179413437 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/S | rs773430543 | -1.7 | 0.998 | D | 0.573 | 0.691 | 0.815499709358 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
I/S | rs773430543 | -1.7 | 0.998 | D | 0.573 | 0.691 | 0.815499709358 | gnomAD-4.0.0 | 3.18239E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86541E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7401 | likely_pathogenic | 0.7448 | pathogenic | -1.751 | Destabilizing | 0.992 | D | 0.391 | neutral | None | None | None | None | I |
I/C | 0.8245 | likely_pathogenic | 0.8196 | pathogenic | -1.083 | Destabilizing | 1.0 | D | 0.568 | neutral | None | None | None | None | I |
I/D | 0.9609 | likely_pathogenic | 0.9612 | pathogenic | -1.001 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | I |
I/E | 0.8962 | likely_pathogenic | 0.9036 | pathogenic | -0.98 | Destabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | I |
I/F | 0.33 | likely_benign | 0.3416 | ambiguous | -1.294 | Destabilizing | 0.998 | D | 0.491 | neutral | N | 0.502826441 | None | None | I |
I/G | 0.9163 | likely_pathogenic | 0.9189 | pathogenic | -2.101 | Highly Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | I |
I/H | 0.8359 | likely_pathogenic | 0.8448 | pathogenic | -1.318 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | I |
I/K | 0.7527 | likely_pathogenic | 0.7735 | pathogenic | -1.051 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | I |
I/L | 0.2229 | likely_benign | 0.2241 | benign | -0.854 | Destabilizing | 0.889 | D | 0.341 | neutral | N | 0.497911689 | None | None | I |
I/M | 0.1874 | likely_benign | 0.191 | benign | -0.658 | Destabilizing | 0.998 | D | 0.514 | neutral | N | 0.498027048 | None | None | I |
I/N | 0.6985 | likely_pathogenic | 0.7065 | pathogenic | -0.88 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | D | 0.545417733 | None | None | I |
I/P | 0.971 | likely_pathogenic | 0.9686 | pathogenic | -1.122 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | I |
I/Q | 0.7995 | likely_pathogenic | 0.8081 | pathogenic | -1.028 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
I/R | 0.6787 | likely_pathogenic | 0.697 | pathogenic | -0.512 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | I |
I/S | 0.6771 | likely_pathogenic | 0.6795 | pathogenic | -1.559 | Destabilizing | 0.998 | D | 0.573 | neutral | D | 0.52655301 | None | None | I |
I/T | 0.4792 | ambiguous | 0.4925 | ambiguous | -1.407 | Destabilizing | 0.989 | D | 0.496 | neutral | N | 0.509916786 | None | None | I |
I/V | 0.1044 | likely_benign | 0.1059 | benign | -1.122 | Destabilizing | 0.333 | N | 0.219 | neutral | N | 0.499250828 | None | None | I |
I/W | 0.9197 | likely_pathogenic | 0.9182 | pathogenic | -1.36 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | I |
I/Y | 0.7633 | likely_pathogenic | 0.7724 | pathogenic | -1.123 | Destabilizing | 1.0 | D | 0.547 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.