Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30973 | 93142;93143;93144 | chr2:178548709;178548708;178548707 | chr2:179413436;179413435;179413434 |
N2AB | 29332 | 88219;88220;88221 | chr2:178548709;178548708;178548707 | chr2:179413436;179413435;179413434 |
N2A | 28405 | 85438;85439;85440 | chr2:178548709;178548708;178548707 | chr2:179413436;179413435;179413434 |
N2B | 21908 | 65947;65948;65949 | chr2:178548709;178548708;178548707 | chr2:179413436;179413435;179413434 |
Novex-1 | 22033 | 66322;66323;66324 | chr2:178548709;178548708;178548707 | chr2:179413436;179413435;179413434 |
Novex-2 | 22100 | 66523;66524;66525 | chr2:178548709;178548708;178548707 | chr2:179413436;179413435;179413434 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/P | None | None | 0.784 | N | 0.421 | 0.285 | 0.427254322456 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
H/Q | rs765351582 | 0.416 | 0.01 | N | 0.165 | 0.122 | 0.0920862733494 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
H/Q | rs765351582 | 0.416 | 0.01 | N | 0.165 | 0.122 | 0.0920862733494 | gnomAD-4.0.0 | 6.84188E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99454E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.2676 | likely_benign | 0.2675 | benign | -0.128 | Destabilizing | 0.176 | N | 0.282 | neutral | None | None | None | None | N |
H/C | 0.1896 | likely_benign | 0.1942 | benign | 0.253 | Stabilizing | 0.995 | D | 0.332 | neutral | None | None | None | None | N |
H/D | 0.2063 | likely_benign | 0.211 | benign | 0.142 | Stabilizing | 0.27 | N | 0.311 | neutral | N | 0.35914694 | None | None | N |
H/E | 0.2418 | likely_benign | 0.2592 | benign | 0.177 | Stabilizing | 0.329 | N | 0.191 | neutral | None | None | None | None | N |
H/F | 0.3164 | likely_benign | 0.3024 | benign | 0.56 | Stabilizing | 0.981 | D | 0.381 | neutral | None | None | None | None | N |
H/G | 0.3854 | ambiguous | 0.3887 | ambiguous | -0.408 | Destabilizing | 0.495 | N | 0.299 | neutral | None | None | None | None | N |
H/I | 0.2529 | likely_benign | 0.2463 | benign | 0.591 | Stabilizing | 0.704 | D | 0.432 | neutral | None | None | None | None | N |
H/K | 0.2284 | likely_benign | 0.2321 | benign | -0.059 | Destabilizing | 0.329 | N | 0.306 | neutral | None | None | None | None | N |
H/L | 0.1294 | likely_benign | 0.1258 | benign | 0.591 | Stabilizing | 0.425 | N | 0.375 | neutral | N | 0.412634708 | None | None | N |
H/M | 0.412 | ambiguous | 0.4013 | ambiguous | 0.397 | Stabilizing | 0.944 | D | 0.343 | neutral | None | None | None | None | N |
H/N | 0.0977 | likely_benign | 0.0974 | benign | -0.074 | Destabilizing | 0.01 | N | 0.149 | neutral | N | 0.428161521 | None | None | N |
H/P | 0.6399 | likely_pathogenic | 0.6744 | pathogenic | 0.375 | Stabilizing | 0.784 | D | 0.421 | neutral | N | 0.465853117 | None | None | N |
H/Q | 0.1406 | likely_benign | 0.1468 | benign | 0.027 | Stabilizing | 0.01 | N | 0.165 | neutral | N | 0.421272834 | None | None | N |
H/R | 0.1072 | likely_benign | 0.1117 | benign | -0.442 | Destabilizing | 0.473 | N | 0.179 | neutral | N | 0.393355514 | None | None | N |
H/S | 0.1948 | likely_benign | 0.1931 | benign | -0.172 | Destabilizing | 0.037 | N | 0.185 | neutral | None | None | None | None | N |
H/T | 0.2133 | likely_benign | 0.2103 | benign | -0.032 | Destabilizing | 0.013 | N | 0.199 | neutral | None | None | None | None | N |
H/V | 0.2076 | likely_benign | 0.2054 | benign | 0.375 | Stabilizing | 0.704 | D | 0.398 | neutral | None | None | None | None | N |
H/W | 0.4787 | ambiguous | 0.4733 | ambiguous | 0.667 | Stabilizing | 0.995 | D | 0.337 | neutral | None | None | None | None | N |
H/Y | 0.1182 | likely_benign | 0.1171 | benign | 0.912 | Stabilizing | 0.917 | D | 0.29 | neutral | N | 0.447440715 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.