Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3098 | 9517;9518;9519 | chr2:178768027;178768026;178768025 | chr2:179632754;179632753;179632752 |
N2AB | 3098 | 9517;9518;9519 | chr2:178768027;178768026;178768025 | chr2:179632754;179632753;179632752 |
N2A | 3098 | 9517;9518;9519 | chr2:178768027;178768026;178768025 | chr2:179632754;179632753;179632752 |
N2B | 3052 | 9379;9380;9381 | chr2:178768027;178768026;178768025 | chr2:179632754;179632753;179632752 |
Novex-1 | 3052 | 9379;9380;9381 | chr2:178768027;178768026;178768025 | chr2:179632754;179632753;179632752 |
Novex-2 | 3052 | 9379;9380;9381 | chr2:178768027;178768026;178768025 | chr2:179632754;179632753;179632752 |
Novex-3 | 3098 | 9517;9518;9519 | chr2:178768027;178768026;178768025 | chr2:179632754;179632753;179632752 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/E | None | None | 0.001 | N | 0.177 | 0.167 | 0.168933306366 | gnomAD-4.0.0 | 3.42037E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49647E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2077 | likely_benign | 0.158 | benign | -0.025 | Destabilizing | 0.035 | N | 0.347 | neutral | None | None | None | None | N |
Q/C | 0.7182 | likely_pathogenic | 0.635 | pathogenic | -0.161 | Destabilizing | 0.935 | D | 0.322 | neutral | None | None | None | None | N |
Q/D | 0.3441 | ambiguous | 0.264 | benign | -0.105 | Destabilizing | 0.035 | N | 0.316 | neutral | None | None | None | None | N |
Q/E | 0.094 | likely_benign | 0.0871 | benign | -0.147 | Destabilizing | 0.001 | N | 0.177 | neutral | N | 0.445463093 | None | None | N |
Q/F | 0.6819 | likely_pathogenic | 0.5985 | pathogenic | -0.428 | Destabilizing | 0.38 | N | 0.335 | neutral | None | None | None | None | N |
Q/G | 0.3275 | likely_benign | 0.2525 | benign | -0.141 | Destabilizing | 0.149 | N | 0.383 | neutral | None | None | None | None | N |
Q/H | 0.2069 | likely_benign | 0.1693 | benign | 0.087 | Stabilizing | None | N | 0.193 | neutral | N | 0.510439237 | None | None | N |
Q/I | 0.3374 | likely_benign | 0.3093 | benign | 0.183 | Stabilizing | 0.555 | D | 0.357 | neutral | None | None | None | None | N |
Q/K | 0.1237 | likely_benign | 0.1025 | benign | -0.001 | Destabilizing | 0.052 | N | 0.342 | neutral | N | 0.482056386 | None | None | N |
Q/L | 0.1334 | likely_benign | 0.1219 | benign | 0.183 | Stabilizing | 0.117 | N | 0.385 | neutral | N | 0.483925839 | None | None | N |
Q/M | 0.3239 | likely_benign | 0.2906 | benign | 0.027 | Stabilizing | 0.791 | D | 0.318 | neutral | None | None | None | None | N |
Q/N | 0.2385 | likely_benign | 0.1866 | benign | -0.332 | Destabilizing | 0.081 | N | 0.295 | neutral | None | None | None | None | N |
Q/P | 0.0878 | likely_benign | 0.0685 | benign | 0.138 | Stabilizing | None | N | 0.167 | neutral | N | 0.488625352 | None | None | N |
Q/R | 0.1527 | likely_benign | 0.1254 | benign | 0.191 | Stabilizing | 0.117 | N | 0.321 | neutral | N | 0.494779425 | None | None | N |
Q/S | 0.229 | likely_benign | 0.1662 | benign | -0.277 | Destabilizing | 0.067 | N | 0.31 | neutral | None | None | None | None | N |
Q/T | 0.1958 | likely_benign | 0.1603 | benign | -0.192 | Destabilizing | 0.149 | N | 0.364 | neutral | None | None | None | None | N |
Q/V | 0.225 | likely_benign | 0.2034 | benign | 0.138 | Stabilizing | 0.149 | N | 0.381 | neutral | None | None | None | None | N |
Q/W | 0.6203 | likely_pathogenic | 0.4935 | ambiguous | -0.527 | Destabilizing | 0.935 | D | 0.336 | neutral | None | None | None | None | N |
Q/Y | 0.4882 | ambiguous | 0.408 | ambiguous | -0.217 | Destabilizing | 0.235 | N | 0.34 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.