Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30981 | 93166;93167;93168 | chr2:178548685;178548684;178548683 | chr2:179413412;179413411;179413410 |
N2AB | 29340 | 88243;88244;88245 | chr2:178548685;178548684;178548683 | chr2:179413412;179413411;179413410 |
N2A | 28413 | 85462;85463;85464 | chr2:178548685;178548684;178548683 | chr2:179413412;179413411;179413410 |
N2B | 21916 | 65971;65972;65973 | chr2:178548685;178548684;178548683 | chr2:179413412;179413411;179413410 |
Novex-1 | 22041 | 66346;66347;66348 | chr2:178548685;178548684;178548683 | chr2:179413412;179413411;179413410 |
Novex-2 | 22108 | 66547;66548;66549 | chr2:178548685;178548684;178548683 | chr2:179413412;179413411;179413410 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 1.0 | D | 0.847 | 0.86 | 0.912582988975 | gnomAD-4.0.0 | 7.52609E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.89403E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9295 | likely_pathogenic | 0.922 | pathogenic | -2.484 | Highly Destabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | N |
L/C | 0.9061 | likely_pathogenic | 0.894 | pathogenic | -1.841 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
L/D | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -3.281 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
L/E | 0.9978 | likely_pathogenic | 0.9974 | pathogenic | -2.945 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
L/F | 0.5879 | likely_pathogenic | 0.5876 | pathogenic | -1.495 | Destabilizing | 1.0 | D | 0.783 | deleterious | N | 0.497504659 | None | None | N |
L/G | 0.9939 | likely_pathogenic | 0.9922 | pathogenic | -3.105 | Highly Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
L/H | 0.9926 | likely_pathogenic | 0.9903 | pathogenic | -3.004 | Highly Destabilizing | 1.0 | D | 0.821 | deleterious | D | 0.546603638 | None | None | N |
L/I | 0.1955 | likely_benign | 0.2097 | benign | -0.61 | Destabilizing | 0.999 | D | 0.636 | neutral | N | 0.51278453 | None | None | N |
L/K | 0.9954 | likely_pathogenic | 0.9946 | pathogenic | -1.875 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
L/M | 0.2679 | likely_benign | 0.2758 | benign | -0.918 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
L/N | 0.9981 | likely_pathogenic | 0.9974 | pathogenic | -2.643 | Highly Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
L/P | 0.999 | likely_pathogenic | 0.9984 | pathogenic | -1.227 | Destabilizing | 1.0 | D | 0.847 | deleterious | D | 0.558124527 | None | None | N |
L/Q | 0.9887 | likely_pathogenic | 0.9863 | pathogenic | -2.228 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
L/R | 0.9901 | likely_pathogenic | 0.9883 | pathogenic | -2.116 | Highly Destabilizing | 1.0 | D | 0.846 | deleterious | D | 0.558124527 | None | None | N |
L/S | 0.9947 | likely_pathogenic | 0.9932 | pathogenic | -3.159 | Highly Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
L/T | 0.9812 | likely_pathogenic | 0.9764 | pathogenic | -2.647 | Highly Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
L/V | 0.1969 | likely_benign | 0.2163 | benign | -1.227 | Destabilizing | 0.999 | D | 0.638 | neutral | N | 0.50697486 | None | None | N |
L/W | 0.9762 | likely_pathogenic | 0.9734 | pathogenic | -1.91 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
L/Y | 0.9625 | likely_pathogenic | 0.9599 | pathogenic | -1.686 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.