Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30985 | 93178;93179;93180 | chr2:178548673;178548672;178548671 | chr2:179413400;179413399;179413398 |
N2AB | 29344 | 88255;88256;88257 | chr2:178548673;178548672;178548671 | chr2:179413400;179413399;179413398 |
N2A | 28417 | 85474;85475;85476 | chr2:178548673;178548672;178548671 | chr2:179413400;179413399;179413398 |
N2B | 21920 | 65983;65984;65985 | chr2:178548673;178548672;178548671 | chr2:179413400;179413399;179413398 |
Novex-1 | 22045 | 66358;66359;66360 | chr2:178548673;178548672;178548671 | chr2:179413400;179413399;179413398 |
Novex-2 | 22112 | 66559;66560;66561 | chr2:178548673;178548672;178548671 | chr2:179413400;179413399;179413398 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/T | rs748877597 | 0.283 | 0.801 | N | 0.367 | 0.135 | 0.262175524916 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 9.8E-05 | None | 0 | 0 | 0 |
N/T | rs748877597 | 0.283 | 0.801 | N | 0.367 | 0.135 | 0.262175524916 | gnomAD-4.0.0 | 2.73676E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.63725E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2545 | likely_benign | 0.2817 | benign | -0.313 | Destabilizing | 0.842 | D | 0.381 | neutral | None | None | None | None | I |
N/C | 0.3401 | ambiguous | 0.3615 | ambiguous | 0.504 | Stabilizing | 0.998 | D | 0.541 | neutral | None | None | None | None | I |
N/D | 0.1156 | likely_benign | 0.1314 | benign | -0.233 | Destabilizing | 0.012 | N | 0.284 | neutral | N | 0.441356452 | None | None | I |
N/E | 0.3241 | likely_benign | 0.3426 | ambiguous | -0.288 | Destabilizing | 0.016 | N | 0.327 | neutral | None | None | None | None | I |
N/F | 0.5329 | ambiguous | 0.5919 | pathogenic | -0.822 | Destabilizing | 0.991 | D | 0.484 | neutral | None | None | None | None | I |
N/G | 0.2911 | likely_benign | 0.2985 | benign | -0.448 | Destabilizing | 0.007 | N | 0.202 | neutral | None | None | None | None | I |
N/H | 0.1276 | likely_benign | 0.1385 | benign | -0.616 | Destabilizing | 0.966 | D | 0.419 | neutral | N | 0.468648716 | None | None | I |
N/I | 0.3008 | likely_benign | 0.3422 | ambiguous | -0.046 | Destabilizing | 0.966 | D | 0.481 | neutral | N | 0.458306369 | None | None | I |
N/K | 0.2708 | likely_benign | 0.2771 | benign | 0.241 | Stabilizing | 0.669 | D | 0.325 | neutral | N | 0.428581942 | None | None | I |
N/L | 0.328 | likely_benign | 0.3496 | ambiguous | -0.046 | Destabilizing | 0.949 | D | 0.444 | neutral | None | None | None | None | I |
N/M | 0.3606 | ambiguous | 0.3881 | ambiguous | 0.557 | Stabilizing | 0.998 | D | 0.469 | neutral | None | None | None | None | I |
N/P | 0.7608 | likely_pathogenic | 0.8014 | pathogenic | -0.111 | Destabilizing | 0.974 | D | 0.451 | neutral | None | None | None | None | I |
N/Q | 0.2951 | likely_benign | 0.3075 | benign | -0.279 | Destabilizing | 0.904 | D | 0.369 | neutral | None | None | None | None | I |
N/R | 0.3574 | ambiguous | 0.3708 | ambiguous | 0.379 | Stabilizing | 0.949 | D | 0.367 | neutral | None | None | None | None | I |
N/S | 0.1222 | likely_benign | 0.1291 | benign | 0.073 | Stabilizing | 0.625 | D | 0.383 | neutral | N | 0.432987684 | None | None | I |
N/T | 0.1787 | likely_benign | 0.1981 | benign | 0.139 | Stabilizing | 0.801 | D | 0.367 | neutral | N | 0.469815276 | None | None | I |
N/V | 0.3037 | likely_benign | 0.3408 | ambiguous | -0.111 | Destabilizing | 0.974 | D | 0.459 | neutral | None | None | None | None | I |
N/W | 0.7739 | likely_pathogenic | 0.8045 | pathogenic | -0.819 | Destabilizing | 0.998 | D | 0.601 | neutral | None | None | None | None | I |
N/Y | 0.1613 | likely_benign | 0.1813 | benign | -0.53 | Destabilizing | 0.989 | D | 0.463 | neutral | N | 0.509488385 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.