Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30988 | 93187;93188;93189 | chr2:178548664;178548663;178548662 | chr2:179413391;179413390;179413389 |
N2AB | 29347 | 88264;88265;88266 | chr2:178548664;178548663;178548662 | chr2:179413391;179413390;179413389 |
N2A | 28420 | 85483;85484;85485 | chr2:178548664;178548663;178548662 | chr2:179413391;179413390;179413389 |
N2B | 21923 | 65992;65993;65994 | chr2:178548664;178548663;178548662 | chr2:179413391;179413390;179413389 |
Novex-1 | 22048 | 66367;66368;66369 | chr2:178548664;178548663;178548662 | chr2:179413391;179413390;179413389 |
Novex-2 | 22115 | 66568;66569;66570 | chr2:178548664;178548663;178548662 | chr2:179413391;179413390;179413389 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | 0.997 | N | 0.595 | 0.293 | 0.185906805712 | gnomAD-4.0.0 | 1.59116E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02444E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9469 | likely_pathogenic | 0.9467 | pathogenic | -0.007 | Destabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | I |
R/C | 0.6277 | likely_pathogenic | 0.6336 | pathogenic | -0.111 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
R/D | 0.9904 | likely_pathogenic | 0.989 | pathogenic | -0.182 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | I |
R/E | 0.9262 | likely_pathogenic | 0.9132 | pathogenic | -0.13 | Destabilizing | 0.999 | D | 0.697 | prob.neutral | None | None | None | None | I |
R/F | 0.9629 | likely_pathogenic | 0.9645 | pathogenic | -0.255 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
R/G | 0.9082 | likely_pathogenic | 0.892 | pathogenic | -0.186 | Destabilizing | 1.0 | D | 0.634 | neutral | N | 0.486838196 | None | None | I |
R/H | 0.3643 | ambiguous | 0.376 | ambiguous | -0.682 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | I |
R/I | 0.8454 | likely_pathogenic | 0.8627 | pathogenic | 0.428 | Stabilizing | 1.0 | D | 0.743 | deleterious | N | 0.472239433 | None | None | I |
R/K | 0.332 | likely_benign | 0.3405 | ambiguous | -0.093 | Destabilizing | 0.997 | D | 0.595 | neutral | N | 0.512235115 | None | None | I |
R/L | 0.8205 | likely_pathogenic | 0.8357 | pathogenic | 0.428 | Stabilizing | 1.0 | D | 0.634 | neutral | None | None | None | None | I |
R/M | 0.8997 | likely_pathogenic | 0.9037 | pathogenic | 0.056 | Stabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | I |
R/N | 0.974 | likely_pathogenic | 0.9729 | pathogenic | 0.152 | Stabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
R/P | 0.9584 | likely_pathogenic | 0.9623 | pathogenic | 0.303 | Stabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
R/Q | 0.353 | ambiguous | 0.3533 | ambiguous | 0.041 | Stabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
R/S | 0.9694 | likely_pathogenic | 0.9682 | pathogenic | -0.154 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | N | 0.463845642 | None | None | I |
R/T | 0.938 | likely_pathogenic | 0.9384 | pathogenic | 0.021 | Stabilizing | 1.0 | D | 0.682 | prob.neutral | N | 0.476354037 | None | None | I |
R/V | 0.9048 | likely_pathogenic | 0.9154 | pathogenic | 0.303 | Stabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | I |
R/W | 0.633 | likely_pathogenic | 0.6414 | pathogenic | -0.336 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | I |
R/Y | 0.8768 | likely_pathogenic | 0.8824 | pathogenic | 0.069 | Stabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.