Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30996 | 93211;93212;93213 | chr2:178548640;178548639;178548638 | chr2:179413367;179413366;179413365 |
N2AB | 29355 | 88288;88289;88290 | chr2:178548640;178548639;178548638 | chr2:179413367;179413366;179413365 |
N2A | 28428 | 85507;85508;85509 | chr2:178548640;178548639;178548638 | chr2:179413367;179413366;179413365 |
N2B | 21931 | 66016;66017;66018 | chr2:178548640;178548639;178548638 | chr2:179413367;179413366;179413365 |
Novex-1 | 22056 | 66391;66392;66393 | chr2:178548640;178548639;178548638 | chr2:179413367;179413366;179413365 |
Novex-2 | 22123 | 66592;66593;66594 | chr2:178548640;178548639;178548638 | chr2:179413367;179413366;179413365 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs1698155054 | None | 0.002 | N | 0.419 | 0.152 | 0.322510055762 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
L/P | rs751341499 | -1.267 | 0.916 | N | 0.853 | 0.62 | None | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
L/P | rs751341499 | -1.267 | 0.916 | N | 0.853 | 0.62 | None | gnomAD-4.0.0 | 5.47345E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39668E-06 | 0 | 3.31312E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8155 | likely_pathogenic | 0.809 | pathogenic | -2.405 | Highly Destabilizing | 0.399 | N | 0.755 | deleterious | None | None | None | None | N |
L/C | 0.5674 | likely_pathogenic | 0.5546 | ambiguous | -2.046 | Highly Destabilizing | 0.982 | D | 0.761 | deleterious | None | None | None | None | N |
L/D | 0.9983 | likely_pathogenic | 0.9979 | pathogenic | -2.501 | Highly Destabilizing | 0.935 | D | 0.852 | deleterious | None | None | None | None | N |
L/E | 0.991 | likely_pathogenic | 0.9891 | pathogenic | -2.225 | Highly Destabilizing | 0.826 | D | 0.842 | deleterious | None | None | None | None | N |
L/F | 0.1257 | likely_benign | 0.1235 | benign | -1.451 | Destabilizing | 0.002 | N | 0.419 | neutral | N | 0.480886714 | None | None | N |
L/G | 0.9663 | likely_pathogenic | 0.9597 | pathogenic | -2.987 | Highly Destabilizing | 0.826 | D | 0.841 | deleterious | None | None | None | None | N |
L/H | 0.9394 | likely_pathogenic | 0.9291 | pathogenic | -2.594 | Highly Destabilizing | 0.931 | D | 0.853 | deleterious | N | 0.49392854 | None | None | N |
L/I | 0.1242 | likely_benign | 0.1388 | benign | -0.699 | Destabilizing | 0.201 | N | 0.676 | prob.neutral | N | 0.454514963 | None | None | N |
L/K | 0.9822 | likely_pathogenic | 0.9794 | pathogenic | -1.622 | Destabilizing | 0.826 | D | 0.829 | deleterious | None | None | None | None | N |
L/M | 0.1593 | likely_benign | 0.1599 | benign | -1.017 | Destabilizing | 0.826 | D | 0.691 | prob.neutral | None | None | None | None | N |
L/N | 0.984 | likely_pathogenic | 0.9813 | pathogenic | -2.091 | Highly Destabilizing | 0.935 | D | 0.854 | deleterious | None | None | None | None | N |
L/P | 0.9949 | likely_pathogenic | 0.9947 | pathogenic | -1.251 | Destabilizing | 0.916 | D | 0.853 | deleterious | N | 0.49392854 | None | None | N |
L/Q | 0.9427 | likely_pathogenic | 0.9301 | pathogenic | -1.834 | Destabilizing | 0.935 | D | 0.839 | deleterious | None | None | None | None | N |
L/R | 0.9605 | likely_pathogenic | 0.954 | pathogenic | -1.63 | Destabilizing | 0.781 | D | 0.833 | deleterious | N | 0.49392854 | None | None | N |
L/S | 0.9685 | likely_pathogenic | 0.9656 | pathogenic | -2.842 | Highly Destabilizing | 0.826 | D | 0.823 | deleterious | None | None | None | None | N |
L/T | 0.9246 | likely_pathogenic | 0.9185 | pathogenic | -2.398 | Highly Destabilizing | 0.826 | D | 0.766 | deleterious | None | None | None | None | N |
L/V | 0.1333 | likely_benign | 0.1447 | benign | -1.251 | Destabilizing | 0.201 | N | 0.693 | prob.neutral | N | 0.461363577 | None | None | N |
L/W | 0.788 | likely_pathogenic | 0.7778 | pathogenic | -1.769 | Destabilizing | 0.947 | D | 0.835 | deleterious | None | None | None | None | N |
L/Y | 0.6845 | likely_pathogenic | 0.668 | pathogenic | -1.486 | Destabilizing | 0.539 | D | 0.766 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.