Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31004 | 93235;93236;93237 | chr2:178548616;178548615;178548614 | chr2:179413343;179413342;179413341 |
N2AB | 29363 | 88312;88313;88314 | chr2:178548616;178548615;178548614 | chr2:179413343;179413342;179413341 |
N2A | 28436 | 85531;85532;85533 | chr2:178548616;178548615;178548614 | chr2:179413343;179413342;179413341 |
N2B | 21939 | 66040;66041;66042 | chr2:178548616;178548615;178548614 | chr2:179413343;179413342;179413341 |
Novex-1 | 22064 | 66415;66416;66417 | chr2:178548616;178548615;178548614 | chr2:179413343;179413342;179413341 |
Novex-2 | 22131 | 66616;66617;66618 | chr2:178548616;178548615;178548614 | chr2:179413343;179413342;179413341 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | rs762024916 | 0.154 | 0.055 | D | 0.279 | 0.109 | 0.170165803431 | gnomAD-2.1.1 | 2.01E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.63388E-04 | None | 0 | 0 | 0 |
S/N | rs762024916 | 0.154 | 0.055 | D | 0.279 | 0.109 | 0.170165803431 | gnomAD-4.0.0 | 7.52596E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15931E-04 | 1.65662E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0897 | likely_benign | 0.0856 | benign | -0.317 | Destabilizing | 0.007 | N | 0.293 | neutral | None | None | None | None | I |
S/C | 0.0774 | likely_benign | 0.0732 | benign | -0.246 | Destabilizing | 0.612 | D | 0.43 | neutral | N | 0.492039567 | None | None | I |
S/D | 0.3908 | ambiguous | 0.3814 | ambiguous | 0.055 | Stabilizing | 0.072 | N | 0.268 | neutral | None | None | None | None | I |
S/E | 0.334 | likely_benign | 0.3443 | ambiguous | -0.056 | Destabilizing | 0.016 | N | 0.283 | neutral | None | None | None | None | I |
S/F | 0.1982 | likely_benign | 0.1967 | benign | -1.016 | Destabilizing | 0.356 | N | 0.511 | neutral | None | None | None | None | I |
S/G | 0.097 | likely_benign | 0.0928 | benign | -0.384 | Destabilizing | 0.024 | N | 0.28 | neutral | N | 0.502381914 | None | None | I |
S/H | 0.1905 | likely_benign | 0.1973 | benign | -0.928 | Destabilizing | 0.356 | N | 0.427 | neutral | None | None | None | None | I |
S/I | 0.1154 | likely_benign | 0.1194 | benign | -0.272 | Destabilizing | 0.093 | N | 0.515 | neutral | D | 0.524325418 | None | None | I |
S/K | 0.2342 | likely_benign | 0.2627 | benign | -0.405 | Destabilizing | None | N | 0.221 | neutral | None | None | None | None | I |
S/L | 0.1011 | likely_benign | 0.1005 | benign | -0.272 | Destabilizing | 0.038 | N | 0.469 | neutral | None | None | None | None | I |
S/M | 0.1397 | likely_benign | 0.1425 | benign | 0.016 | Stabilizing | 0.356 | N | 0.421 | neutral | None | None | None | None | I |
S/N | 0.1034 | likely_benign | 0.101 | benign | -0.117 | Destabilizing | 0.055 | N | 0.279 | neutral | D | 0.529827238 | None | None | I |
S/P | 0.5931 | likely_pathogenic | 0.5948 | pathogenic | -0.261 | Destabilizing | 0.136 | N | 0.428 | neutral | None | None | None | None | I |
S/Q | 0.2222 | likely_benign | 0.2289 | benign | -0.403 | Destabilizing | 0.038 | N | 0.318 | neutral | None | None | None | None | I |
S/R | 0.2217 | likely_benign | 0.2407 | benign | -0.204 | Destabilizing | None | N | 0.25 | neutral | N | 0.484766952 | None | None | I |
S/T | 0.0676 | likely_benign | 0.067 | benign | -0.231 | Destabilizing | None | N | 0.219 | neutral | N | 0.467893345 | None | None | I |
S/V | 0.1359 | likely_benign | 0.1312 | benign | -0.261 | Destabilizing | 0.038 | N | 0.479 | neutral | None | None | None | None | I |
S/W | 0.3382 | likely_benign | 0.3459 | ambiguous | -1.037 | Destabilizing | 0.864 | D | 0.544 | neutral | None | None | None | None | I |
S/Y | 0.185 | likely_benign | 0.1852 | benign | -0.748 | Destabilizing | 0.356 | N | 0.512 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.