Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31020 | 93283;93284;93285 | chr2:178548568;178548567;178548566 | chr2:179413295;179413294;179413293 |
N2AB | 29379 | 88360;88361;88362 | chr2:178548568;178548567;178548566 | chr2:179413295;179413294;179413293 |
N2A | 28452 | 85579;85580;85581 | chr2:178548568;178548567;178548566 | chr2:179413295;179413294;179413293 |
N2B | 21955 | 66088;66089;66090 | chr2:178548568;178548567;178548566 | chr2:179413295;179413294;179413293 |
Novex-1 | 22080 | 66463;66464;66465 | chr2:178548568;178548567;178548566 | chr2:179413295;179413294;179413293 |
Novex-2 | 22147 | 66664;66665;66666 | chr2:178548568;178548567;178548566 | chr2:179413295;179413294;179413293 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1312330710 | -0.48 | 1.0 | D | 0.938 | 0.712 | 0.903324448379 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
P/L | rs1312330710 | -0.48 | 1.0 | D | 0.938 | 0.712 | 0.903324448379 | gnomAD-4.0.0 | 3.18221E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71608E-06 | 0 | 0 |
P/R | rs1312330710 | -1.698 | 1.0 | D | 0.961 | 0.759 | 0.813260256209 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
P/R | rs1312330710 | -1.698 | 1.0 | D | 0.961 | 0.759 | 0.813260256209 | gnomAD-4.0.0 | 1.59111E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.4108E-04 | 0 | 0 | 0 |
P/S | rs944645264 | -2.858 | 1.0 | D | 0.907 | 0.806 | 0.752574999803 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
P/S | rs944645264 | -2.858 | 1.0 | D | 0.907 | 0.806 | 0.752574999803 | gnomAD-4.0.0 | 1.09469E-05 | None | None | None | None | N | None | 5.97586E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.25923E-05 | 0 | 0 |
P/T | rs944645264 | -2.426 | 1.0 | D | 0.902 | 0.765 | 0.748360532628 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
P/T | rs944645264 | -2.426 | 1.0 | D | 0.902 | 0.765 | 0.748360532628 | gnomAD-4.0.0 | 3.4209E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99449E-07 | 4.63725E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.223 | likely_benign | 0.2233 | benign | -2.229 | Highly Destabilizing | 1.0 | D | 0.86 | deleterious | D | 0.605334952 | None | None | N |
P/C | 0.6388 | likely_pathogenic | 0.6325 | pathogenic | -1.836 | Destabilizing | 1.0 | D | 0.925 | deleterious | None | None | None | None | N |
P/D | 0.997 | likely_pathogenic | 0.9961 | pathogenic | -3.099 | Highly Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
P/E | 0.9886 | likely_pathogenic | 0.9873 | pathogenic | -2.853 | Highly Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | N |
P/F | 0.9927 | likely_pathogenic | 0.9917 | pathogenic | -1.214 | Destabilizing | 1.0 | D | 0.945 | deleterious | None | None | None | None | N |
P/G | 0.9297 | likely_pathogenic | 0.9172 | pathogenic | -2.778 | Highly Destabilizing | 1.0 | D | 0.927 | deleterious | None | None | None | None | N |
P/H | 0.9846 | likely_pathogenic | 0.9795 | pathogenic | -2.569 | Highly Destabilizing | 1.0 | D | 0.914 | deleterious | D | 0.663517199 | None | None | N |
P/I | 0.6078 | likely_pathogenic | 0.6128 | pathogenic | -0.674 | Destabilizing | 1.0 | D | 0.955 | deleterious | None | None | None | None | N |
P/K | 0.9953 | likely_pathogenic | 0.9937 | pathogenic | -1.825 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
P/L | 0.6458 | likely_pathogenic | 0.6347 | pathogenic | -0.674 | Destabilizing | 1.0 | D | 0.938 | deleterious | D | 0.647094229 | None | None | N |
P/M | 0.8753 | likely_pathogenic | 0.8652 | pathogenic | -0.91 | Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
P/N | 0.989 | likely_pathogenic | 0.9855 | pathogenic | -2.241 | Highly Destabilizing | 1.0 | D | 0.961 | deleterious | None | None | None | None | N |
P/Q | 0.9701 | likely_pathogenic | 0.9653 | pathogenic | -2.034 | Highly Destabilizing | 1.0 | D | 0.925 | deleterious | None | None | None | None | N |
P/R | 0.9827 | likely_pathogenic | 0.9779 | pathogenic | -1.716 | Destabilizing | 1.0 | D | 0.961 | deleterious | D | 0.631044508 | None | None | N |
P/S | 0.7024 | likely_pathogenic | 0.6843 | pathogenic | -2.806 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | D | 0.630842704 | None | None | N |
P/T | 0.4521 | ambiguous | 0.4222 | ambiguous | -2.421 | Highly Destabilizing | 1.0 | D | 0.902 | deleterious | D | 0.589487035 | None | None | N |
P/V | 0.3098 | likely_benign | 0.2998 | benign | -1.169 | Destabilizing | 1.0 | D | 0.937 | deleterious | None | None | None | None | N |
P/W | 0.9985 | likely_pathogenic | 0.9984 | pathogenic | -1.795 | Destabilizing | 1.0 | D | 0.925 | deleterious | None | None | None | None | N |
P/Y | 0.997 | likely_pathogenic | 0.9961 | pathogenic | -1.441 | Destabilizing | 1.0 | D | 0.953 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.