Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31025 | 93298;93299;93300 | chr2:178548553;178548552;178548551 | chr2:179413280;179413279;179413278 |
N2AB | 29384 | 88375;88376;88377 | chr2:178548553;178548552;178548551 | chr2:179413280;179413279;179413278 |
N2A | 28457 | 85594;85595;85596 | chr2:178548553;178548552;178548551 | chr2:179413280;179413279;179413278 |
N2B | 21960 | 66103;66104;66105 | chr2:178548553;178548552;178548551 | chr2:179413280;179413279;179413278 |
Novex-1 | 22085 | 66478;66479;66480 | chr2:178548553;178548552;178548551 | chr2:179413280;179413279;179413278 |
Novex-2 | 22152 | 66679;66680;66681 | chr2:178548553;178548552;178548551 | chr2:179413280;179413279;179413278 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.999 | N | 0.606 | 0.463 | 0.398872588132 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
F/V | None | None | 1.0 | N | 0.786 | 0.512 | 0.519728874731 | gnomAD-4.0.0 | 6.00161E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.56251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.6935 | likely_pathogenic | 0.5492 | ambiguous | -2.332 | Highly Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
F/C | 0.3128 | likely_benign | 0.2162 | benign | -1.638 | Destabilizing | 1.0 | D | 0.859 | deleterious | N | 0.481888857 | None | None | N |
F/D | 0.9732 | likely_pathogenic | 0.933 | pathogenic | -1.067 | Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | N |
F/E | 0.9648 | likely_pathogenic | 0.9216 | pathogenic | -0.957 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
F/G | 0.8985 | likely_pathogenic | 0.8089 | pathogenic | -2.688 | Highly Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
F/H | 0.8001 | likely_pathogenic | 0.6916 | pathogenic | -0.969 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
F/I | 0.237 | likely_benign | 0.1575 | benign | -1.246 | Destabilizing | 1.0 | D | 0.749 | deleterious | N | 0.371275583 | None | None | N |
F/K | 0.957 | likely_pathogenic | 0.9105 | pathogenic | -1.622 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
F/L | 0.8393 | likely_pathogenic | 0.7649 | pathogenic | -1.246 | Destabilizing | 0.999 | D | 0.606 | neutral | N | 0.393805726 | None | None | N |
F/M | 0.5472 | ambiguous | 0.443 | ambiguous | -1.105 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
F/N | 0.9081 | likely_pathogenic | 0.8379 | pathogenic | -1.738 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
F/P | 0.9721 | likely_pathogenic | 0.9397 | pathogenic | -1.604 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
F/Q | 0.9064 | likely_pathogenic | 0.8388 | pathogenic | -1.732 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
F/R | 0.9045 | likely_pathogenic | 0.8357 | pathogenic | -1.029 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
F/S | 0.6895 | likely_pathogenic | 0.5405 | ambiguous | -2.559 | Highly Destabilizing | 1.0 | D | 0.864 | deleterious | N | 0.497434313 | None | None | N |
F/T | 0.7252 | likely_pathogenic | 0.5908 | pathogenic | -2.338 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
F/V | 0.211 | likely_benign | 0.147 | benign | -1.604 | Destabilizing | 1.0 | D | 0.786 | deleterious | N | 0.305663879 | None | None | N |
F/W | 0.6033 | likely_pathogenic | 0.4788 | ambiguous | -0.47 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
F/Y | 0.2548 | likely_benign | 0.1982 | benign | -0.77 | Destabilizing | 0.999 | D | 0.614 | neutral | N | 0.476675039 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.