Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31028 | 93307;93308;93309 | chr2:178548544;178548543;178548542 | chr2:179413271;179413270;179413269 |
N2AB | 29387 | 88384;88385;88386 | chr2:178548544;178548543;178548542 | chr2:179413271;179413270;179413269 |
N2A | 28460 | 85603;85604;85605 | chr2:178548544;178548543;178548542 | chr2:179413271;179413270;179413269 |
N2B | 21963 | 66112;66113;66114 | chr2:178548544;178548543;178548542 | chr2:179413271;179413270;179413269 |
Novex-1 | 22088 | 66487;66488;66489 | chr2:178548544;178548543;178548542 | chr2:179413271;179413270;179413269 |
Novex-2 | 22155 | 66688;66689;66690 | chr2:178548544;178548543;178548542 | chr2:179413271;179413270;179413269 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | None | None | 0.999 | N | 0.599 | 0.446 | 0.650362002609 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4844 | ambiguous | 0.4386 | ambiguous | -0.555 | Destabilizing | 0.989 | D | 0.465 | neutral | N | 0.47063845 | None | None | N |
V/C | 0.8605 | likely_pathogenic | 0.8471 | pathogenic | -0.775 | Destabilizing | 1.0 | D | 0.66 | neutral | None | None | None | None | N |
V/D | 0.8918 | likely_pathogenic | 0.8736 | pathogenic | -0.15 | Destabilizing | 0.995 | D | 0.683 | prob.neutral | None | None | None | None | N |
V/E | 0.8164 | likely_pathogenic | 0.7813 | pathogenic | -0.239 | Destabilizing | 0.733 | D | 0.358 | neutral | N | 0.517963003 | None | None | N |
V/F | 0.4449 | ambiguous | 0.4496 | ambiguous | -0.93 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | N |
V/G | 0.6054 | likely_pathogenic | 0.5614 | ambiguous | -0.695 | Destabilizing | 0.998 | D | 0.685 | prob.neutral | N | 0.51948394 | None | None | N |
V/H | 0.9217 | likely_pathogenic | 0.9065 | pathogenic | -0.433 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
V/I | 0.0786 | likely_benign | 0.0772 | benign | -0.325 | Destabilizing | 0.997 | D | 0.482 | neutral | None | None | None | None | N |
V/K | 0.7997 | likely_pathogenic | 0.7486 | pathogenic | -0.189 | Destabilizing | 0.998 | D | 0.615 | neutral | None | None | None | None | N |
V/L | 0.4505 | ambiguous | 0.415 | ambiguous | -0.325 | Destabilizing | 0.987 | D | 0.481 | neutral | N | 0.51934838 | None | None | N |
V/M | 0.2622 | likely_benign | 0.2496 | benign | -0.287 | Destabilizing | 0.999 | D | 0.599 | neutral | N | 0.509760249 | None | None | N |
V/N | 0.756 | likely_pathogenic | 0.7212 | pathogenic | -0.002 | Destabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | N |
V/P | 0.9322 | likely_pathogenic | 0.9159 | pathogenic | -0.369 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
V/Q | 0.7922 | likely_pathogenic | 0.7447 | pathogenic | -0.26 | Destabilizing | 0.998 | D | 0.715 | prob.delet. | None | None | None | None | N |
V/R | 0.7613 | likely_pathogenic | 0.6948 | pathogenic | 0.171 | Stabilizing | 0.998 | D | 0.764 | deleterious | None | None | None | None | N |
V/S | 0.6512 | likely_pathogenic | 0.6037 | pathogenic | -0.447 | Destabilizing | 0.998 | D | 0.611 | neutral | None | None | None | None | N |
V/T | 0.4334 | ambiguous | 0.3957 | ambiguous | -0.435 | Destabilizing | 0.996 | D | 0.477 | neutral | None | None | None | None | N |
V/W | 0.9646 | likely_pathogenic | 0.9632 | pathogenic | -0.995 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
V/Y | 0.8724 | likely_pathogenic | 0.8524 | pathogenic | -0.615 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.