Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31034 | 93325;93326;93327 | chr2:178548526;178548525;178548524 | chr2:179413253;179413252;179413251 |
N2AB | 29393 | 88402;88403;88404 | chr2:178548526;178548525;178548524 | chr2:179413253;179413252;179413251 |
N2A | 28466 | 85621;85622;85623 | chr2:178548526;178548525;178548524 | chr2:179413253;179413252;179413251 |
N2B | 21969 | 66130;66131;66132 | chr2:178548526;178548525;178548524 | chr2:179413253;179413252;179413251 |
Novex-1 | 22094 | 66505;66506;66507 | chr2:178548526;178548525;178548524 | chr2:179413253;179413252;179413251 |
Novex-2 | 22161 | 66706;66707;66708 | chr2:178548526;178548525;178548524 | chr2:179413253;179413252;179413251 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1575474576 | None | 0.999 | N | 0.546 | 0.496 | 0.348324211639 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.92976E-04 | None | 0 | 0 | 0 | 0 | 0 |
T/A | rs1575474576 | None | 0.999 | N | 0.546 | 0.496 | 0.348324211639 | gnomAD-4.0.0 | 5.12411E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 9.69697E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1618 | likely_benign | 0.1515 | benign | -1.006 | Destabilizing | 0.999 | D | 0.546 | neutral | N | 0.48039814 | None | None | N |
T/C | 0.5796 | likely_pathogenic | 0.5774 | pathogenic | -0.713 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
T/D | 0.9246 | likely_pathogenic | 0.8863 | pathogenic | -1.088 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
T/E | 0.8481 | likely_pathogenic | 0.8093 | pathogenic | -0.938 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
T/F | 0.4083 | ambiguous | 0.3965 | ambiguous | -0.644 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
T/G | 0.5756 | likely_pathogenic | 0.5161 | ambiguous | -1.402 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
T/H | 0.5841 | likely_pathogenic | 0.5448 | ambiguous | -1.606 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
T/I | 0.2201 | likely_benign | 0.212 | benign | 0.013 | Stabilizing | 1.0 | D | 0.775 | deleterious | N | 0.519887098 | None | None | N |
T/K | 0.7513 | likely_pathogenic | 0.7151 | pathogenic | -0.735 | Destabilizing | 1.0 | D | 0.753 | deleterious | N | 0.470282829 | None | None | N |
T/L | 0.1471 | likely_benign | 0.1474 | benign | 0.013 | Stabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | N |
T/M | 0.1123 | likely_benign | 0.1178 | benign | 0.071 | Stabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
T/N | 0.3905 | ambiguous | 0.3502 | ambiguous | -1.189 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
T/P | 0.777 | likely_pathogenic | 0.737 | pathogenic | -0.293 | Destabilizing | 1.0 | D | 0.789 | deleterious | D | 0.526761641 | None | None | N |
T/Q | 0.5825 | likely_pathogenic | 0.5606 | ambiguous | -1.046 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
T/R | 0.6703 | likely_pathogenic | 0.6285 | pathogenic | -0.847 | Destabilizing | 1.0 | D | 0.795 | deleterious | N | 0.482853675 | None | None | N |
T/S | 0.2152 | likely_benign | 0.1923 | benign | -1.415 | Destabilizing | 0.999 | D | 0.535 | neutral | N | 0.485734452 | None | None | N |
T/V | 0.1325 | likely_benign | 0.1381 | benign | -0.293 | Destabilizing | 0.999 | D | 0.561 | neutral | None | None | None | None | N |
T/W | 0.8066 | likely_pathogenic | 0.8044 | pathogenic | -0.757 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
T/Y | 0.5214 | ambiguous | 0.4891 | ambiguous | -0.429 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.